Azospirillum argentinense: D3093_26620
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Entry
D3093_26620 CDS
T08628
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
aare
Azospirillum argentinense
Pathway
aare03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aare00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D3093_26620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aare03019
]
D3093_26620
Messenger RNA biogenesis [BR:
aare03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
D3093_26620
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
RMMBL
Motif
Other DBs
NCBI-ProteinID:
QCN98889
UniProt:
A0A4D8PVD8
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Position
p2:complement(923556..925067)
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AA seq
503 aa
AA seq
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MRSGKSGGPRFQKNQNPKPYERPKATRPPGAPVPGPVPGHDEILFIPLGGCSRIGMNMAL
YGHAGKWLIVDAGVAFMGDEAPGIDSLMADPSFIEERMDEVVGLVVTHAHEDHIGAIHHL
WPGLECPIYATPFAAHVIRERLKESGGLRHARIRVFEPGASFEIGPFGIETITVTHSIPE
PVSVAIHTKAGTVLHTGDWKFDPHPLVGPTMDLDALKRLGDRGVLAMMCDSTNANVDGTT
GSEADARAGLIEAFAGRKGAIAVTGFASNVARMQAVAEAAAAHDRKVVLVGRSMLRMEKA
ARASGYLEKAPEFISIMEASWTPRRNLVFLCTGSQGEERAALSRLARDGHRDLWLESGDT
VIFSARAIPGNEVVLADVQDHLKAKGVTVVTPADAPVHVSGHPKRDDLIRMYDLIRPRFS
VPVHGTIEHLEAHARLARACGVERALVPEDGDILRIAREGTAVIGHMEAKRLANTGRELI
PWTGLPVAEDVDALTEAVESMAA
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcagcggcaagtccggcggcccgcgtttccagaagaaccagaaccccaagccctac
gagcgccccaaggcgacccgtccgccgggcgcgccggttcccggcccggtgccgggccac
gacgagatcctgttcatcccgctcggcggctgctcgcgcatcggcatgaacatggcgctc
tacggccatgccggaaaatggctgatcgtggacgccggcgtcgccttcatgggcgacgag
gcgccgggaatcgacagcctgatggccgatccctccttcatcgaggagcggatggacgag
gtggtcgggctggtcgtcacccacgcccacgaagaccacatcggcgccatccaccatctg
tggccggggctggaatgcccgatctacgcgacccccttcgccgcccacgtcatccgtgaa
cggctgaaggagtccggcggcctgcgccacgcccgcatccgggtgttcgagccgggcgcc
tccttcgagatcggtcctttcggcatcgagaccatcaccgtcacccactcgatccccgag
ccggtgtcggtggcgatccacaccaaggctggcacggtcctgcacaccggcgactggaag
ttcgacccgcacccgctggtcggcccgaccatggacctggacgcgctgaagcggctgggc
gatcgcggcgtactggcgatgatgtgcgacagcaccaacgccaacgtcgacggcaccacg
gggtcggaggcggacgcccgcgccggcctgatcgaggccttcgccgggcgcaagggcgcc
atcgcggtgaccggcttcgcgtccaacgtcgcccgcatgcaggcggtggcggaggctgcg
gcggcccacgaccgcaaggtggtgctggtcggccggtcgatgctgcgcatggagaaggcg
gcccgcgccagcggctatctggagaaggctccggagttcatctccatcatggaagcctcc
tggacgccgcgccggaacctcgtcttcctgtgcaccggcagccagggcgaagaacgggcg
gcgctcagccggctcgcccgcgacggccaccgcgacctgtggctggagagcggcgacacg
gtgatcttctccgcccgcgccatccccggcaacgaggtggtgctcgccgacgtgcaggac
catctgaaggccaagggcgtgacggtggtgacccccgccgacgcgccggtgcatgtgtcg
ggccacccgaagcgggacgacctgatccgcatgtacgacctgatccgcccgcgcttctcc
gtgccggtgcacggcaccatcgagcatctggaggcccacgcccgcctcgcccgcgcctgc
ggcgtggaacgggcgctggttccggaggacggcgacatcctgcggatcgcgcgggaaggc
accgcggtgatcggccatatggaggccaagcgcctcgccaacaccgggcgggaactgatc
ccctggacgggcctgcccgtcgcggaggatgtggacgctctgaccgaagccgtggaatcg
atggccgcctga
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