Amedibacterium intestinale JCM 30884: Aargi30884_01460
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Entry
Aargi30884_01460 CDS
T06426
Name
(GenBank) helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
aarg
Amedibacterium intestinale JCM 30884
Pathway
aarg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aarg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Aargi30884_01460
09124 Replication and repair
03420 Nucleotide excision repair
Aargi30884_01460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aarg03021
]
Aargi30884_01460
03036 Chromosome and associated proteins [BR:
aarg03036
]
Aargi30884_01460
03400 DNA repair and recombination proteins [BR:
aarg03400
]
Aargi30884_01460
Enzymes [BR:
aarg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Aargi30884_01460
Transcription machinery [BR:
aarg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Aargi30884_01460
Chromosome and associated proteins [BR:
aarg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Aargi30884_01460
DNA repair and recombination proteins [BR:
aarg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Aargi30884_01460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
DEAD
ResIII
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
BBK21243
UniProt:
A0A6N4TER5
LinkDB
All DBs
Position
complement(145994..148318)
Genome browser
AA seq
774 aa
AA seq
DB search
MECRLSVRELVEFLYKSGDLSYTPASIERANLGSRIHRLLQSQGKGNYQSEVYLKLETEL
DTINFIIDGRADGIFKEEDNIILEEIKTTAIPYDEIDDSNFLHFAQAYCYAHIYVQQNGL
DNILVQLTYYQIETKQIKTFRQVKTKEELLSFYTQTLSLYLRWAKLTQKIRMNSAQSLKS
LVFPFENYRSGQREFASGVYKTILDKRSLFAQAPTGIGKTISTLFPSLKAIGEGKAEKIF
YLCAKNITSSVVYNTLNLLYEQKLPFKSVGITAKDKICFLEERNCDPHICPYAKGYYSRN
KDALYELLSNEDLMDKEILSQYAKKHSICPFELSLDASLYADLIVCDYNYVFDPRVYLKR
FFMEKGNYIFLVDEAHNLVDRAREMYSAVLSKSSFQQLSKYIPKEEKQLHSSIKSVLADF
KKLSSLCEDNEFYASNEPQLSILEKINHFIEHCDGYLQSEHDDTYDEDIKVIYFDAVNYL
RISDYYDENFVTWIHKENKDVTIKQFCMNPRTPLKSIMEKGRTSVLFSATLSPIDYYLDL
LGGEDETNRLSLPSPFQKEQSMILINNAISTKYKNRSLSLPSLISYLHAVILSKKGNYII
FCPSYAYMEQIHDAFTNEYPDIQTTIQKENLSEDEKQMFLNQFSSTQKLHVYFCVLGGMF
SEGIDLKGDLLIGTILIGVGLPQINPQQELLKEHFQKEKKMGYAYAYQFPGMNKILQAAG
RVIRSVHDKGVIVFIDERFTTPPYKRLFPNHLQHYQIINEPQKAYLSLLSFWNS
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
ttggaatgtcgtttatctgtaagagagcttgttgaatttctttataaaagtggggatctt
tcttatactccagcctcaatagaacgtgcaaatctaggcagcagaatccatcgtttacta
caatcgcaaggaaaaggaaactaccaaagtgaagtttatttaaaattagaaacagaactc
gataccatcaatttcattatagacggacgtgcagatgggatcttcaaagaagaagataac
attattcttgaagaaatcaaaacaactgctattccttatgatgaaatcgatgattctaat
ttcctgcactttgcacaggcatattgttatgcccacatatatgtacagcaaaatgggtta
gacaatatccttgtacagctaacttattaccaaattgaaacaaaacaaatcaaaacattt
cgacaggtcaaaacaaaagaagaacttctttccttttacacacaaactttatccctttat
cttcgctgggcaaaacttacacaaaagattcgcatgaatagcgctcagtctttgaaatca
cttgtatttccatttgaaaattatcgaagtggacaaagagaatttgccagtggtgtttat
aaaaccatcttagataaacgttctttatttgcccaagctccaactggaatcggaaaaacg
atttctactctttttccatcattaaaagctattggagaaggtaaggcagaaaaaatcttt
tatttatgcgcaaaaaatatcacatccagtgttgtatacaataccttaaatcttttatat
gaacaaaaacttcctttcaaaagtgtcggtattactgcaaaagataaaatttgtttttta
gaagaaagaaattgcgatccacatatttgtccatatgcaaaaggatattacagtcgcaat
aaagatgctttatatgaacttttatccaatgaagatcttatggataaagaaattttatct
cagtatgcgaaaaaacattctatctgcccttttgaattaagtctagatgcttctttatat
gcagatcttattgtttgtgattataattatgtatttgaccctagagtatatttaaaacgt
ttctttatggaaaaaggaaattacatatttcttgtagatgaagcgcataaccttgttgat
cgagctagagaaatgtatagtgctgttctatcaaaaagttctttccagcagctatcaaaa
tatattccaaaagaagaaaaacagctgcattcttctatcaagtctgttcttgcagatttt
aaaaagttatcttctctatgtgaagataacgaattttatgcctccaatgaaccacagctt
tctatattagaaaagataaatcattttattgaacactgtgatggatatttacaaagtgaa
catgatgatacatatgatgaagatattaaagtaatctattttgatgcagtcaattattta
cgtatttcggattactatgatgaaaactttgtaacctggatacataaagagaataaagat
gtaactatcaaacagttttgtatgaatcctagaactcctttaaaatccattatggagaaa
ggaagaacctctgtcttattctctgctacattatcccctattgattattatttggattta
ttaggaggagaagatgaaacaaatcggttatcattgccctctcctttccaaaaagagcaa
tcgatgattcttataaacaacgctatttctacaaaatataagaatcgaagtttatctctt
ccttcccttatatcctatttacatgctgttattttatcaaaaaaaggcaattatatcatt
ttttgtccaagttatgcgtatatggaacaaattcatgatgctttcacaaacgaataccct
gacatccaaactacgattcaaaaagaaaatttatcagaggacgaaaagcagatgttttta
aatcagttttccagcacacagaaactacatgtatatttctgtgtacttggcggcatgttt
tcagaaggtattgacttaaaaggtgatttattaataggaaccattttaataggtgttgga
ctccctcaaatcaatcctcagcaagaattattaaaagaacattttcaaaaagaaaaaaag
atgggttatgcttatgcataccagtttccgggaatgaataaaatcttacaggcagctggt
cgtgtcatacgcagcgtccatgataaaggtgttattgtttttattgatgaacgttttact
accccaccatacaagcgattatttccaaatcatcttcaacattatcaaattataaatgag
ccgcagaaagcatacctttcgctgctttcattctggaacagctag
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