Amedibacterium intestinale JCM 30884: Aargi30884_02700
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Entry
Aargi30884_02700 CDS
T06426
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
aarg
Amedibacterium intestinale JCM 30884
Brite
KEGG Orthology (KO) [BR:
aarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aarg03400
]
Aargi30884_02700 (sbcD)
DNA repair and recombination proteins [BR:
aarg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Aargi30884_02700 (sbcD)
Archaeal homologous recombinant proteins
Aargi30884_02700 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Metallophos_3
Epimerase_2
DUF1686
RNA_pol_Rpb8
DUF6837
Motif
Other DBs
NCBI-ProteinID:
BBK21367
UniProt:
A0A6N4TF81
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All DBs
Position
268778..269902
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AA seq
374 aa
AA seq
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MKILHTADWHLGIALHKQSLMEDQYDFIEQLKQIVMDENIDVIIIAGDIYDTTLASKEAI
ELYDKCMHMLCMELKKQVIVIAGNHDSPVRLSSCSALLAPMGLHVYGKLEEKVKPLILGN
TWFYPIPYFHPQTVANLYGVEIQDEEEAFLCIQNDLEEKLNKKEVCHIAIAHTFMANASV
SESDRFATIGGSGMVSSTVFDKFDYVALGHLHRHQKAGQNAYYSGSPLPYSFSEASYAKK
VLIYDTDNGEIQEKCIQPLHSLKTYGGKLEDVITQLKQDNDTQSYVKIEIEDKQATIDMM
EYFQELHEGILQLSGIHEETQSRIGVDLQTMEAMQDDSIVKQFFKDMFQEELDEEEMQLF
YEAQKAVKEEEYAS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttacatactgccgactggcatttgggaattgcattgcataaacaaagttta
atggaagatcaatatgattttatagaacagttaaaacaaattgtgatggatgaaaacatc
gatgtgatcatcattgcaggagatatttacgatacgacacttgccagtaaagaagccatc
gaactctatgataagtgcatgcatatgctttgtatggagttaaaaaagcaggtcattgtt
attgcgggaaatcatgattcaccagtacgtttatcatcctgttccgctttgctggcacca
atgggtttgcatgtatatggaaaactggaagaaaaagtaaaacctcttatattaggaaat
acatggttttatcctatcccctactttcatccgcagacagttgcgaatctttatggcgtt
gaaatccaagatgaagaggaagcatttttatgtatccaaaacgatttagaggagaaatta
aacaagaaagaagtctgtcatattgcgattgcgcatacgtttatggcaaatgccagcgtg
agtgaaagtgatcgtttcgcaacgataggagggagtgggatggtttcttccacggtattt
gataagtttgactatgttgccttggggcatcttcatcgtcatcaaaaagcaggacagaac
gcatattacagtggttctccgcttccatactcattttcagaagcttcctatgcgaaaaaa
gtattaatttatgatacagataatggtgaaattcaagaaaaatgtatacagcctcttcat
tcattaaaaacatatggtggaaaattagaggatgtcatcacacaattaaaacaagataat
gatacacaaagctatgtgaaaatagaaattgaagataagcaggcaacgatcgatatgatg
gaatattttcaagaacttcacgaagggattttacagttaagcggcatacatgaggaaaca
caaagtcgtattggtgttgatttacagacaatggaagccatgcaggatgacagtattgtg
aaacagttttttaaggatatgtttcaagaagaactagatgaagaagaaatgcagcttttt
tatgaagcacagaaagcggtaaaggaggaagagtatgcttcctga
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