Amedibacterium intestinale JCM 30884: Aargi30884_02710
Help
Entry
Aargi30884_02710 CDS
T06426
Symbol
sbcC
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
aarg
Amedibacterium intestinale JCM 30884
Brite
KEGG Orthology (KO) [BR:
aarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aarg03400
]
Aargi30884_02710 (sbcC)
DNA repair and recombination proteins [BR:
aarg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Aargi30884_02710 (sbcC)
Archaeal homologous recombinant proteins
Aargi30884_02710 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
NACHT
Mg_chelatase
AAA_16
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BBK21368
UniProt:
A0A6N4TEK3
LinkDB
All DBs
Position
269892..272921
Genome browser
AA seq
1009 aa
AA seq
DB search
MLPEKLVIQAFGPYVEKQEIDFSDISSHHLFLIQGETGSGKTMLLDAITFALFGKSSGGQ
RESMEAMRSRFASDDIHTFVEFIFSLKGKRYRFVRKVEVKTKRNKEKVWKSSVDAGEIVN
GEFLPFFENPKLKNVEEKAEELIGLRYEQFVQVMVLPQGKFEQFLTSKSEEKQEILKTLF
QMEHWENINAWLVEYIKQEKQKLDDLQGKQQIYLETLKEESIEQAKATMDSLKTELEEKK
KELIKQNKKVACLEKELVEQKQRNEDEQAFETCRKELDTLQEKQGAINAQKEKLAHYKKL
QGIFPYYHAYDTAAKQYEKRMQQTQLAYEKLKKIQEESSLEKERKQQVESLQKHEEICRK
TYQSLQEDMVLLKEIEILNKTWEEHQKQQKEILEKEENVSRRLEDTLRKKDAMQKDIQIL
KQELQSKEDIDNRHRKLEQAKILDEEKQSINIALEKEIQNQQMQEEKRKSYELEVETADA
KHEKVYQQYLQTAALQLSKDLEEGKPCPVCGSLHHPSYAHVSHMYVDLQELKTYKEKLEQ
AKEQYQKQKDLLKEINLSIQTKKQRCIQIDKEILQLLEKPFTKEEFETTQNNLQIMQKKE
KQWQNLLVDEQNIQNEIQRLYVLKSEYQNKSITYKEENSAYSATLKQKTSQLHSQDSMEV
IKKHYQQTEQKQKQYEKEIEMLQKQIEEVKLQEAAVKENYAHAQEEEKKAKEEKKQAEDR
FVKQCFTYGVEKEEIVEIPEENILLKMEESIQSYEQNVVEVSARKEMLEARLQKMESKDV
PALEEESEQARNGLKQLQEDTAKQRSQWELYRATLKKAEDTQRLIEVQMPKFLKKQHFVK
AMRGDNGVGIERYVLGVLLQTILQYANQLLRQVHDGRYQLYRSDEAIGRVRKSGLELGIY
DSYSMGQRSVVSLSGGEKFLVSLALSLATSFVVQSKNGGMQLDAMFIDEGFGTLDEHSIA
DALHILQTMTKRKGMVGIISHVEILKENIADGIEVCKTRKGSTIRFRKA
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctgaaaaattagtaatacaggcgtttggaccttatgttgaaaaacaggaaatt
gatttttctgatatatccagccatcatttgtttttgattcagggagaaacaggaagtggg
aaaacgatgcttttagatgcgattacctttgcattgtttggaaaaagcagtggtggacaa
agggaaagtatggaagcgatgcgctctcgctttgcaagtgatgatatacatacatttgtg
gaatttatattttctttaaaagggaaacgatatcgttttgtgcgaaaagtagaggtaaag
acaaagcgaaacaaagaaaaagtatggaaaagcagtgtcgatgccggtgaaattgtaaat
ggagaatttcttccgttttttgagaatccaaaactaaaaaatgtggaggaaaaagcagaa
gaactgattggacttcgctatgaacagtttgtacaggtcatggtgcttccacaggggaaa
tttgaacagtttctgacaagcaaaagtgaagaaaagcaagaaattttaaagacattgttt
cagatggaacactgggaaaatatcaacgcgtggctggtagaatacataaaacaagaaaaa
cagaaactggatgatctgcagggaaaacagcaaatctatctggaaacgttaaaagaagaa
tctattgaacaggcaaaagcaactatggattctttgaaaacagagctggaagaaaagaaa
aaggaactcataaaacaaaataaaaaggtagcgtgtttggagaaagaacttgtagaacag
aaacaaagaaatgaagatgaacaggcatttgaaacgtgcaggaaagaactggatacatta
caagaaaaacaaggtgccatcaatgcacaaaaagaaaagctggctcattataaaaaactg
cagggtatttttccctattatcatgcatatgatacagctgcaaaacaatatgaaaaaagg
atgcagcaaacccagttggcatatgaaaaactaaaaaagatacaagaggaaagttcttta
gaaaaagagcgaaaacagcaggtagaaagtttacagaaacatgaggaaatatgcagaaaa
acatatcaatctttacaggaagatatggttcttttaaaagaaatagagatactaaacaaa
acatgggaagaacatcaaaaacagcagaaagaaatcctggaaaaagaagaaaacgttagt
aggcgtttggaagatacgctaagaaaaaaagatgcaatgcagaaggatatacaaatatta
aaacaggaattacagagcaaagaagatatagataatagacatcgaaagctggaacaggca
aaaatactggatgaagaaaaacaaagtatcaatatagcattagaaaaagaaatccagaac
cagcagatgcaggaagagaagagaaaatcctatgaattggaagttgaaactgcagatgca
aaacatgaaaaagtgtaccagcagtatttacaaacagctgcgctgcagctttccaaagat
ttagaagaaggaaaaccttgtccggtatgtggttctttgcatcatccttcctatgcacat
gtttctcatatgtatgttgatttacaggaattaaaaacatataaagaaaaactggaacag
gcgaaagaacagtatcagaaacaaaaggacttactaaaagaaatcaacctttctatacaa
acgaaaaaacagcgttgtatacagattgataaagaaattttgcagttattggagaaacca
tttacgaaagaagagtttgagactacgcaaaataatcttcaaataatgcagaaaaaagaa
aaacagtggcaaaacttgctggtggatgagcaaaatatacaaaacgaaatccaaagactg
tatgtattaaaaagtgaatatcaaaacaaatctatcacatataaagaagaaaacagtgca
tatagtgctactttgaaacagaaaacaagtcagctgcattctcaggattctatggaagtt
ataaagaagcactaccagcagacagaacaaaaacaaaagcagtatgaaaaagaaatagag
atgttacagaagcaaattgaagaagtgaaattacaggaagctgctgtgaaagaaaattat
gcacatgcacaagaggaagaaaaaaaggcaaaagaagaaaagaaacaggcagaagatagg
tttgtaaaacaatgttttacatatggagtagagaaagaagaaattgtagaaataccagaa
gaaaacatacttttaaaaatggaagagagcattcaaagctatgaacaaaatgttgtggaa
gtaagtgcacgaaaggaaatgttagaagcacgtttacaaaagatggaaagcaaggatgtt
cctgctttggaagaagaaagtgaacaggcaagaaatggattaaaacaactgcaggaagat
acggcaaaacaaagaagtcaatgggaattgtatcgagctacgttaaaaaaagcagaggat
acacaacgtcttatagaagtacagatgccgaaatttttaaagaaacagcactttgtaaaa
gcaatgcgtggcgataatggagtgggaattgaacgatatgtattaggtgtgcttctgcaa
acgattttacaatatgcaaatcagctgttgcgacaggttcatgatggaagatatcagctg
tatcgaagtgatgaagcgattggaagagtgcgaaaaagtggattagaactgggaatttat
gattcctattccatgggacagcgaagtgtggtatcgttaagtggaggagaaaagtttctg
gtatcacttgcattatcactggcaacctcttttgttgtgcagtcaaaaaatgggggtatg
cagctggatgcgatgtttattgatgaaggatttggtacattggatgaacatagtattgcg
gatgctttgcatatcttgcagacaatgacaaagcgaaaaggaatggttggaattatttct
catgtagagatattaaaggaaaatattgcagatggtatagaagtatgtaaaacaagaaaa
ggaagtacaattcgatttagaaaggcgtga
DBGET
integrated database retrieval system
