Amedibacterium intestinale JCM 30884: Aargi30884_03910
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Entry
Aargi30884_03910 CDS
T06426
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aarg
Amedibacterium intestinale JCM 30884
Pathway
aarg03030
DNA replication
aarg03430
Mismatch repair
aarg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aarg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Aargi30884_03910 (dnaE)
03430 Mismatch repair
Aargi30884_03910 (dnaE)
03440 Homologous recombination
Aargi30884_03910 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aarg03032
]
Aargi30884_03910 (dnaE)
03400 DNA repair and recombination proteins [BR:
aarg03400
]
Aargi30884_03910 (dnaE)
Enzymes [BR:
aarg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Aargi30884_03910 (dnaE)
DNA replication proteins [BR:
aarg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Aargi30884_03910 (dnaE)
DNA repair and recombination proteins [BR:
aarg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Aargi30884_03910 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DUF655
Motif
Other DBs
NCBI-ProteinID:
BBK21488
UniProt:
A0A6N4TEY4
LinkDB
All DBs
Position
393887..396973
Genome browser
AA seq
1028 aa
AA seq
DB search
MSVALHVRSSYTLLQSTLTIPQIVECAKKHGYKAVALTDKQVLHGAMQFYHACKEAAIKP
ILGMEVDVVEGENIFGFVLLAKNDDGYKDLMKLSTLLNTEQHVSLSLEELMLYTKHCVVI
TNGDQNKMETMLLKEDWEEMKLFLAQCNSYFSDFYVSIARNDSPLLKQKNVQLKRLCKSM
EIKTVALSRIYTADAQDDLIFKTLCAIKQGVSLEDKMLNYSPRRYFRSQEEMEQLYDSDD
LMMSNMISDMCNVTMSFPKAQLPKFKNRYGVSSDEFLKNLCHKGLEKRMGFKQIPQVYQK
RLSYELDIIIRMGFADYFLIVWDFIRFAKTKNIYIGPGRGSAAGSLVSYCLGITHADPIR
YHLLFERFLNPERVSMPDIDTDFPDDRREEVIQYVYELYGKHHVAHIITFNTLGAKQVLR
DVGKAMMVPIRQIDSLCRLVPNKLKVTLQDAYDDEPRFKQMINSSETLKKLFAISQRLEG
LPRHSSLHAAGIILSREQIEEVCPLIDVDEGICATQFTMEYMEELGLIKMDFLGLRNLTI
IDEIVSQLHKNGHAIDIMKIPLNDKKTFDLIQSVDTMGVFQLESEGMKSLIRKIKPRNFE
DIVTTIALFRPGPMENIPEYLKRREHPDTIDYIHPDFKDILENTYGIMIYQEQIMQIAQR
MAGFSLGKADNLRKAISKKKGDQLQSFRKEFVEGSIKKGYEKTLAEHVYELIMKFANYGF
NRSHSVAYGMIAYQMAYLKANAPQYFFRSLLNSVIGSEIKTSEYIFEAKKRKLTVLPPSV
NKSSSLYEIEQNCLRFPLQGIKGIGSAVSTQILKEREKRGEFKDFFDFTARMCGNKIGKK
TIELLIWAGALDEFHMNRTSLSASLDDAIRYGDLVKIEDEDQMLFDFTIVSKPATTSLKE
NNAWKLEKEKEVLGFYLSAHPISMLRERINPNLRTFASLQIYRGYAAFICVIERTRQHRT
KRGDLMLFVVAADETMKFDLVCMPDIYAIHQKDLMKGNYLYVEGKIEKEGSCLVKKITKI
EKEENINP
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggccttgcatgttcgaagttcttatacactattacaaagcacattaacgatt
cctcaaattgtagaatgtgcaaaaaaacatggatataaagcagttgctttaacggataag
caagttctgcacggtgccatgcagttttatcatgcctgtaaagaagcagcaataaaacct
attttgggtatggaagtagatgttgtagaaggagaaaatatttttggttttgtattgctg
gcaaaaaatgatgatggttacaaggatttaatgaaattatcaacgcttctaaatacagaa
cagcatgtttctttatctttggaagaattaatgttatatacaaaacattgtgttgttata
acaaatggtgatcaaaataaaatggaaaccatgctgttgaaagaagactgggaggaaatg
aaattatttttagctcaatgtaactcttatttttcagatttttatgtttctatagctaga
aatgacagcccacttttaaaacaaaaaaatgtacaattaaaacgcctttgtaaaagtatg
gaaataaagacagtagcattgtctcggatttatactgcggatgcacaggatgatcttatt
tttaaaacattatgtgcaattaaacaaggggtatctttagaagataaaatgttaaactat
agtccaagacgttattttcgatctcaggaagaaatggaacaattgtatgattctgatgac
cttatgatgagcaatatgatttcagatatgtgcaatgttacaatgtcctttccaaaagca
cagctccctaaatttaaaaaccgctatggtgtgagcagtgatgaatttttgaaaaatctt
tgtcacaaggggttagaaaagcgtatgggatttaaacaaatcccgcaagtttatcaaaag
cgactttcttatgagttggatattattatacgtatgggatttgcggattactttttaatt
gtatgggattttatacgctttgcgaaaacaaaaaacatttatattggacctggacgagga
agtgcagcaggatctctagtatcttattgtttgggaattacacatgcagatcctattcga
tatcacttgctgtttgaacgttttttgaatccggaacgtgtatctatgccggatattgat
accgattttccagatgatcgaagagaagaggtcattcaatatgtatatgaactttatgga
aaacatcatgtagcacatatcattacctttaatacgttaggggcaaagcaggtgttaaga
gatgtagggaaagcaatgatggtaccgataaggcaaattgattctttgtgtcgtttggtg
ccaaacaaattaaaagttactttacaggatgcatatgatgatgagcctcgctttaaacaa
atgataaactcctctgaaaccttaaagaaactatttgctataagccagcgtttagaggga
cttccaagacactcttccttacatgctgcaggtattattttaagtcgtgaacaaatagaa
gaagtatgtcctttgattgatgtggatgaagggatttgtgctacacagtttaccatggaa
tatatggaagaattaggtcttattaaaatggattttttaggacttagaaatttaacgatt
attgatgaaatagtttctcagctgcataaaaatggacatgcaattgatattatgaaaata
cctctaaatgataagaaaacatttgatcttattcaatcggtagatacaatgggggtgttt
cagttagaaagtgaaggaatgaaaagtcttatacgtaaaataaagcctagaaactttgag
gatattgttacaacgattgccttgttcaggccaggacctatggaaaatataccagaatac
ttaaaaagaagagaacatccggacacgattgactatatacatcctgattttaaagatatc
cttgaaaatacatatggaatcatgatttatcaggaacaaatcatgcagattgcacaacgc
atggcaggtttttctttaggaaaagcggataatcttagaaaagccattagcaagaaaaaa
ggagatcagctgcagagttttcgaaaagagtttgtggaaggatctattaaaaaagggtat
gaaaaaacacttgcagagcacgtatacgaattgatcatgaaatttgctaattatggattt
aatcgttctcactctgttgcttatggtatgatcgcatatcaaatggcatatttaaaagca
aatgcgccacagtatttctttcgttctttattaaatagtgtgattggttcagaaataaaa
acaagtgaatatatttttgaagcaaagaaaagaaaactaactgtattgcctccttctgta
aataaaagtagttctttatatgaaatagaacaaaattgcttgcgttttccattacaggga
atcaaagggataggcagtgctgttagtacacaaattttaaaagaaagagaaaaaagagga
gaatttaaagatttctttgattttacagctcgaatgtgcggtaataaaattggaaagaaa
acgatagaacttttgatatgggcgggtgctcttgatgaatttcatatgaatcgtacatct
ttgtctgcttctttagacgatgctatacgttatggtgatttggtaaaaatagaagatgag
gatcagatgttgtttgattttacaattgtaagtaagccggcaacaacttctttgaaagaa
aataatgcatggaagctggagaaagaaaaggaagtattaggtttttatctgtctgcacac
ccgatttctatgctgcgtgagcgcataaaccctaatttaagaacatttgcgtctttacaa
atatatcgtggatatgcagcatttatatgtgttattgaacgaacacgtcagcatcgcaca
aaacgaggagatttaatgttgtttgtggtagcagcagatgaaacaatgaagtttgatctg
gtatgcatgcctgatatttacgcaattcatcaaaaagatttaatgaaagggaattattta
tatgtagaaggaaaaattgaaaaggaaggttcttgtttagttaaaaaaattaccaaaata
gaaaaagaagaaaatattaatccataa
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