Amedibacterium intestinale JCM 30884: Aargi30884_05340
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Entry
Aargi30884_05340 CDS
T06426
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
aarg
Amedibacterium intestinale JCM 30884
Pathway
aarg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aarg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Aargi30884_05340 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aarg03400
]
Aargi30884_05340 (xseA)
Enzymes [BR:
aarg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Aargi30884_05340 (xseA)
DNA repair and recombination proteins [BR:
aarg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Aargi30884_05340 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BBK21631
UniProt:
A0A6N4TG97
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All DBs
Position
complement(533568..534896)
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AA seq
442 aa
AA seq
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MKQNVFSVSSLVHYLKQTLDNDSNIRSILIKGEISNFTNHRSGHWYFTLKDAKSRISCVM
FASYASRCRFLPKEGTKVIVSASVSMYEAGGSLQLYVNGMQADGLGDLFLQLEQIKKKLS
MEGLFDPNHKKPLPVYPMRIGVISARTGAAIQDILTTISRRWPLAEVCFYPSLVQGISAS
EDIIKNLMRADADGHDVILLARGGGSIEDLWCFNDEKLARCIYAMHTVIVTGVGHETDTT
LVDYVSDARAPTPTAAAELITPNISEVGLHIMKMKTVLVNDMKHRLEKEKAALKPLQEHR
YMKDPLSYVADSQMKLAMHVKELSIMEHQVHAWTQKLSSLSSHLGLYAKKIEREKMEDVK
QKQNLLFLNMEHYKQKANENYMEKVRLLDAFSPLKILTRGYTLTYREKHLVKSIQDVEEQ
DALRIRMQDGYIHTKVTKKEGL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaatgttttcagtgtttcttctttagttcattatctaaagcaaacactggat
aacgatagcaatattcgctcaattcttatcaaaggagaaatcagcaactttacaaatcat
cgaagtggacactggtattttactttgaaagatgcgaaatctcgtattagctgtgtgatg
tttgcatcctatgcatctcgatgtcgtttcttgccaaaagagggaacaaaagtcattgta
agtgcttcagtttctatgtatgaagctggcggaagtttacagttatatgtaaatggcatg
caggcagatgggcttggcgatttgtttttacagctggaacagataaaaaagaaactttct
atggaaggactgtttgatccaaaccataaaaaaccacttcctgtatatcctatgcgaatt
ggtgttatcagtgccagaacaggtgcagccatacaggatattctgacaacgatttctcga
agatggccattagctgaggtttgtttttatccaagtcttgtacagggaatttctgccagt
gaggatattataaaaaatctaatgcgagcagatgctgatggacatgatgttattttgctg
gcaagaggtggaggttctatagaagatttatggtgttttaatgatgaaaaactggcacgt
tgtatctatgcaatgcatacggtcattgtgacaggagttggccatgaaacagatacgaca
ctggtagattatgtaagtgatgccagagcaccaacaccaacagcagccgcagaacttatt
acaccgaatatttcagaagttggtttacatatcatgaagatgaaaaccgtattggtcaat
gatatgaaacatcgtttagaaaaagaaaaagcagcattaaagccactgcaggaacatcgc
tatatgaaagatccattatcttatgtggcagatagccagatgaaacttgctatgcatgta
aaagaactaagtatcatggaacatcaggtacatgcctggacacagaaattatcttcgcta
tcttctcatttgggactttatgccaagaaaatcgaaagagaaaaaatggaagatgtcaaa
caaaaacaaaatcttctattcttaaatatggaacattataaacaaaaagcaaatgaaaat
tatatggaaaaagttcgtctgttagatgcttttagtccattaaaaatattaacacgtgga
tataccttaacttatcgtgagaaacatttagtaaaaagtattcaggatgtagaagaacag
gatgctttgcgtattcgtatgcaggatggatatatccatacaaaagtaacaaagaaggag
gggctgtaa
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