Amedibacterium intestinale JCM 30884: Aargi30884_19190
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Entry
Aargi30884_19190 CDS
T06426
Name
(GenBank) hypothetical protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
aarg
Amedibacterium intestinale JCM 30884
Brite
KEGG Orthology (KO) [BR:
aarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aarg03400
]
Aargi30884_19190
Enzymes [BR:
aarg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Aargi30884_19190
DNA repair and recombination proteins [BR:
aarg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Aargi30884_19190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
ResIII
PDDEXK_1
T2SSE
AAA_30
AAA_22
AAA_16
AAA_11
FolB
Motif
Other DBs
NCBI-ProteinID:
BBK23016
UniProt:
A0A6N4TIG3
LinkDB
All DBs
Position
1899401..1902604
Genome browser
AA seq
1067 aa
AA seq
DB search
MPQWNEMQLKAIETKQKNVLVSASAGSGKTTVLIERLMRLVMEERVEVDAILAMTFTEAA
ANEMKKRLAAALQSAYDTSTKEEEKAYITRQLTSIQTAHISTIHSFCLSIIQDYYYIIGL
DPARISSIMDNGVMEQAKSEALSKAFDIQYEKQDEDFLHTCMMFSSRAENNDALAACIQN
LANLSSSKPNPKKWLEDMKEMYHDIHTLDDIPSFMQDIFFDYLHVQMERYHEVLDRLAYL
YEYRYSEEEKKKTAVMKKYGALGEVEKTLEEKDYEAFRLAFRGIAQGIIPTSPDKEDNEY
HRLRKQSQELEDELLAILFSSTTFLQDIQTLYPIVSKLVEMTLDYRNAYQTIKEEIQCID
FDDMEHFALEILQAKDGEVADIYRNQFVEIMVDEFQDSNDVQNELVLLICKENNVFRVGD
IKQSIYGFRHAKPQLMKGLITNKKENDEIIYLSNNYRSKKMIVDFNNILFKELMNTDGFS
CSYAKEDDVETGVPAQNEDNLPICFHAIFHDEIKKENDLILSKNDFKASYISHEILRKHE
EENRKWKDFVVLVRSNARKENLKAAFDKLNIPYFIDVKSGFYQSNAVQIMLSTLRALLHP
QEDIPFMAAMTSPLFQYNVEDFAHAKLQKEKTQSYYAWFKEHASANFNVFEDLRTNTRTL
SLPDMLNLLYNTNDYYSLHTTLQEKTNLDLLYEKAVNFEDSYATGIAGFLSQIEQIKDAQ
TAEAIPIGSEADVVRVMSIHQSKGLQFPVVYLWSSDSFSMVENKEFCMCDADMGIALKCM
DLPQRYVRTTWYRLAMEHKKNKEELEEEMRILYVATTRAQQEMHIVDCVLSLDTYNRPLT
MSAIYERNGYSSWILQSFLQNPNPLFTIQEVHQLWNDIPLPEEIHPVSKTFQYQKDTKKL
EIITPTAIQKEHLPELNLHKQVRGSSYGTKMHKLMETIGEDTFSIENIKEKAEMLGLQLY
DKQMHSITTLYEHPIYQEALQGQCFHELPFMVKKEDMILHGYMDFVSIQEKIMIIDFKTD
ALEKEEDFKKLYASQLSQYKEAMHILYPSKDIHTYIYSFHLESMIKV
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgccacaatggaatgagatgcagctaaaagccattgaaacaaaacagaaaaatgtcctt
gtttccgcctctgcgggaagtggaaaaactacggtacttattgagcgattgatgcgattg
gttatggaagagcgtgtagaagtcgatgcgatactggcaatgactttcaccgaagctgcc
gccaatgaaatgaaaaaacgactggcagcagccttgcagtctgcctatgacaccagtaca
aaggaagaagaaaaagcatatattacaagacagctgacttctatacaaactgcgcatatt
tctactattcactccttttgtctatctattattcaagattattactatatcattggatta
gatcctgcccgtatttccagtatcatggataatggggtaatggaacaggcaaaaagtgaa
gcactatccaaagcatttgacatccaatatgaaaaacaggatgaggatttcctgcataca
tgtatgatgttttcttcccgtgcagaaaataacgatgcacttgcagcttgtattcaaaat
cttgcgaacctttcttccagtaaaccaaaccctaaaaaatggctggaagatatgaaagaa
atgtatcatgatatccatacccttgatgatattccttcttttatgcaagatatctttttt
gactatctacatgtacaaatggaacgatatcatgaagttcttgatcgtcttgcatattta
tatgaatatcgttacagtgaagaagaaaagaaaaaaacagctgtcatgaaaaagtatgga
gcacttggcgaagtagaaaaaacactagaagaaaaagattatgaagcttttcgactggca
tttcgtggaattgcacagggaatcatccctaccagtccagataaagaagataatgaatat
catcgtttacgaaaacaatcacaggaattggaagatgaactgcttgcaatcttattttct
tccacaacttttctacaggatatccaaaccttataccctatcgttagtaaactggtagaa
atgacattagattatcgaaatgcataccaaactatcaaagaagaaatacagtgtattgac
tttgatgatatggaacattttgcccttgaaatcttacaggcaaaagatggagaagtggcc
gatatttaccgtaaccagtttgtagaaatcatggtggatgaatttcaggacagcaacgat
gttcaaaatgaacttgtattattgatatgcaaagaaaacaatgtattccgcgttggtgat
atcaaacagtcaatttatggttttcgtcatgcgaaaccgcagttgatgaaaggattgatc
acaaacaaaaaagaaaacgatgaaattatttacttatccaacaactatcgttctaaaaaa
atgatcgtagatttcaataatattttatttaaagagctgatgaataccgatggtttttct
tgcagctatgcgaaagaggatgatgtagaaactggggttcctgcacaaaacgaagataac
cttcctatctgtttccatgcgattttccatgatgaaataaaaaaagaaaatgatcttata
ttatccaagaatgattttaaagcgtcttatatttcccatgaaattcttcgaaaacatgaa
gaagaaaatagaaaatggaaagattttgttgtccttgtcagaagcaatgccagaaaagaa
aacctgaaagctgcgtttgataagctgaacattccgtatttcattgatgtaaaatcaggg
ttttatcagtccaatgctgtacaaattatgttatctactttacgtgctctattacatcca
caggaagatattccttttatggccgcaatgacttctcccttattccaatacaatgtagaa
gattttgcccatgcaaaactgcagaaagagaaaacacagtcctattatgcctggtttaaa
gaacatgccagtgcaaattttaacgtgtttgaagatcttcgaacaaacacaagaacactg
tctttaccagatatgttaaaccttttatacaacacaaatgattactattccttgcataca
accttgcaggagaaaacaaatttagacttgttgtatgaaaaagcagttaattttgaagat
agttatgcgacagggattgccggttttttatcacagatcgaacaaatcaaagatgcccag
acagcagaagcgattcccattggtagtgaagccgatgttgtacgtgttatgagtattcat
caatccaaaggattacagtttcctgttgtttatttatggtcttctgattccttcagcatg
gtggaaaataaagaattctgtatgtgtgatgcggatatgggaattgccttaaaatgtatg
gatcttccacagcgttatgtacgcacaacatggtatcgtctagcaatggaacataaaaaa
aataaagaagaactggaagaagaaatgcgtatcttatatgttgcgaccacacgtgcacag
caggaaatgcatattgtagattgtgtcttatctttggatacatacaatcgcccacttacc
atgtccgctatttatgaacgtaatggatactcttcctggatcttacaatccttcctgcaa
aacccaaaccctttatttactattcaggaagttcatcaattgtggaacgacattcctctt
ccagaagaaattcatcctgtatcaaaaacattccaatatcaaaaggatacaaaaaaactg
gaaatcattactccaacagcgattcaaaaagaacatcttccagaattaaaccttcataaa
caagtgcgaggaagcagttatggaacaaagatgcataaactgatggaaaccataggagaa
gatactttttctattgaaaacataaaagaaaaagcagaaatgctaggattacagctatat
gataagcagatgcattccatcacaactctgtatgaacatcccatctatcaagaagcctta
caggggcagtgttttcacgaacttccttttatggtgaaaaaagaagatatgattcttcac
ggatatatggactttgtatctattcaagaaaaaattatgatcattgattttaaaacagat
gcattggaaaaggaagaagattttaaaaagctatatgcttcacagctatcccagtataaa
gaagcaatgcatattttatatccatcaaaagacatacatacgtatatttactctttccat
ttggaaagtatgataaaagtataa
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