Amedibacterium intestinale JCM 30884: Aargi30884_20280
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Entry
Aargi30884_20280 CDS
T06426
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
aarg
Amedibacterium intestinale JCM 30884
Pathway
aarg00260
Glycine, serine and threonine metabolism
aarg00460
Cyanoamino acid metabolism
aarg00630
Glyoxylate and dicarboxylate metabolism
aarg00670
One carbon pool by folate
aarg00680
Methane metabolism
aarg01100
Metabolic pathways
aarg01110
Biosynthesis of secondary metabolites
aarg01120
Microbial metabolism in diverse environments
aarg01200
Carbon metabolism
aarg01230
Biosynthesis of amino acids
aarg01240
Biosynthesis of cofactors
aarg04981
Folate transport and metabolism
Module
aarg_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
aarg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Aargi30884_20280 (glyA)
09102 Energy metabolism
00680 Methane metabolism
Aargi30884_20280 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Aargi30884_20280 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Aargi30884_20280 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Aargi30884_20280 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Aargi30884_20280 (glyA)
Enzymes [BR:
aarg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Aargi30884_20280 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
OKR_DC_1
mCpol
Motif
Other DBs
NCBI-ProteinID:
BBK23125
UniProt:
A0A6N4TL30
LinkDB
All DBs
Position
complement(2031548..2032777)
Genome browser
AA seq
409 aa
AA seq
DB search
MKDKQIQEAILKERERQLYNIELIASENYVSKDVLEAAGSILTNKYAEGYPSKRYYGGCE
HVDVVEDIARERAKKLFGAEHVNVQPHSGSQANMGVYMAVLEPGDTVLGMNLTAGGHLTH
GHPLNFSGTLYNFVDYGVKKEDGRIDYEEVREKALKEKPKLIVAGASAYPRIIDFQKFRE
IADEVGAYLMVDMAHIAGLVAAGLHPNPVPYADFVTTTTHKTLRGPRGGMILCKEKYAAL
LDKKVFPGMQGGPLMHIIAAKAVCFEEALQPEFKTYAKQVIENCRVLADTLKEEGFHIVS
DGSDNHLLLVDVKGSIGMTGKRAEYLLDEAGITCNKNTIPFDEEKPFVTSGIRLGSAAMT
TRGFKEEQFKQVGKWIAKVLKEDNEKVCHEVREEVRALTKQYPLPNEVE
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataagcaaatacaggaagcaattttaaaagaaagagaacgtcagttatataat
atcgaacttatcgcatcggaaaactatgtatcaaaagatgtattagaggcagctggaagt
attcttacgaataaatatgcggaaggatatccatccaaacgttattatggtggatgcgaa
catgtcgatgtggtagaagatatcgccagagaacgtgcgaaaaaattatttggggcagag
cacgtgaatgtacagcctcacagtggttcacaggcaaacatgggtgtgtatatggcggtg
ctggagccaggagatacagttttagggatgaatttaactgctggaggacatttaacacat
ggacatccattgaattttagtggaactttgtataactttgtagattatggggtaaaaaaa
gaagatggacgaattgattatgaggaagtaagagaaaaggccttaaaagaaaaaccaaaa
ttaatcgttgctggtgccagtgcgtatcctcgtatcattgattttcaaaagtttagagaa
attgcggatgaagtcggtgcttatctaatggtggatatggcacatattgccggacttgtg
gcagcaggattgcatccaaatccagttccttatgcagattttgtgacaacaacgacacat
aaaacacttcgcggacctcgtggcggtatgattttatgtaaagaaaaatatgcagcgtta
ctggataaaaaagtattcccaggaatgcagggtggacctttgatgcatatcattgccgca
aaagcagtatgctttgaagaagcgttgcagccggaatttaaaacctatgcaaaacaagtc
attgaaaactgtcgtgttctagcggatactttaaaagaagaagggttccacattgtgagt
gatggaagtgataaccatttattgctggtagatgtgaaaggaagtattggcatgacagga
aaaagagcggagtatctgttagatgaagctggtattacctgcaataaaaataccattcca
ttcgatgaagaaaaaccatttgtcactagcggaattcgtttaggaagtgccgcaatgaca
acacgaggatttaaggaagaacaatttaaacaggtaggaaaatggattgcgaaagtatta
aaagaagataatgaaaaagtatgccatgaagtacgagaagaagtacgtgctcttaccaag
cagtatccacttcctaatgaagtagaataa
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