Amedibacterium intestinale JCM 30884: Aargi30884_21510
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Entry
Aargi30884_21510 CDS
T06426
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
aarg
Amedibacterium intestinale JCM 30884
Brite
KEGG Orthology (KO) [BR:
aarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aarg03032
]
Aargi30884_21510 (gyrB)
03400 DNA repair and recombination proteins [BR:
aarg03400
]
Aargi30884_21510 (gyrB)
Enzymes [BR:
aarg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Aargi30884_21510 (gyrB)
DNA replication proteins [BR:
aarg03032
]
Prokaryotic type
DNA Topoisomerases
Aargi30884_21510 (gyrB)
DNA repair and recombination proteins [BR:
aarg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Aargi30884_21510 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
BBK23248
UniProt:
A0A6N4TK96
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All DBs
Position
complement(2176085..2178031)
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AA seq
648 aa
AA seq
DB search
MDEKQMKEIEELENIKVDHSYTADDIQVLEGLEAVRKRPGMYIGSTSEKGLHHLVWEIVD
NSIDEALAGFASDIEISIEKGDIIRVSDNGRGMPTGIVEKSGISGVETIFTILHAGGKFG
GGAYKVSGGLHGVGASVVNALSEWLEVTVYQNGNIYAMRFENGGKPQGPLEVIGETDKHG
STVRFKADAEIFKETQVYDFDTLNTRIRQLAFLNKGIKLVLRDERGEEPKEIVYKYDGGL
RQYVEYLNKNKNVLHEEVVYVEGVEEGILAEIALQYNDGYMPNIYSFCNNINTAEGGTHE
DGFRLALTRIINAYARDNGMIKKDETLAGDDVREGLTAIISIKHPDPQYEGQTKTKLGNS
EVRKIVSSILGEQLERFFMENPSTAKVIVDKAILASKARMAAKKARELTRRKNALEISSL
PGKLADCSSKDASECEIYIVEGDSAGGSAKQGRNSKFQAILPLRGKILNVEKARLQRIFE
NNEIRSMITAFGCGIGEEMDISKLRYHKIIIMTDADVDGAHICTLMLTFFYRYLRPIIEG
GYVYIAMPPLFKLQKGQRVEYVYDEAGRDEILAQMGENVNIQRYKGLGEMNPEQLWETTM
DPNVRTLKQVNIDDAMVADSVFEMLMGEEVAPRREFIQENAVYADIDI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaaacagatgaaagagattgaagaacttgaaaatataaaagttgatcattct
tatactgctgatgatattcaggttttggaaggtctggaagctgttcgtaaaagacctggt
atgtatattggttcaacaagtgaaaaaggacttcatcatctcgtttgggaaatcgtagat
aactctattgatgaagctttggcaggttttgcaagcgatattgaaatttccattgaaaaa
ggcgatatcattcgtgttagtgataatggtcgaggaatgcctactggtattgttgaaaaa
tctggtatttctggtgttgaaacaatttttacgattttgcatgctggtggtaaatttggc
gggggcgcttataaggtatctggtggtcttcatggggttggtgccagtgttgttaatgca
ttgagtgaatggctggaagtaaccgtttatcaaaatggaaatatatatgccatgcgtttt
gaaaatggaggaaaacctcagggaccattagaagttatcggagaaactgataagcatggt
tctactgttcgttttaaggcggatgcagagatttttaaagaaactcaggtatatgatttt
gatacgttaaatacacgtattcgtcagcttgctttcttgaataaaggaattaagctggta
ttaagagacgagcgaggagaagaaccaaaagaaatcgtttataaatatgatggaggtctt
cgtcagtacgttgaatacctaaataaaaataaaaacgttttacatgaagaagttgtttat
gttgaaggcgtggaagaaggtattttggcagaaatcgcattgcagtataacgatggatac
atgcctaatatttattctttctgtaataatatcaatacggcagagggtggaacgcatgaa
gatggattccgtttggctttgactcgtattattaatgcatatgccagagataatggtatg
attaaaaaagatgaaacgcttgctggggatgatgttcgtgaaggtttaacagctattatt
agtatcaagcatccagatcctcaatatgaaggacagacaaaaacaaaacttggaaattct
gaggtacgtaagattgtttctagtattttaggagagcagctggaacgtttcttcatggaa
aatccttctactgcaaaagttatcgtagataaggcaattcttgccagcaaggctcgtatg
gctgcgaaaaaagccagggagttgacaagaagaaagaatgccttggaaatatcttcttta
cctggtaaattggcagattgttcttcaaaagatgccagtgaatgtgaaatttatatcgtc
gaaggggattctgccggtggtagtgcaaaacagggtagaaattctaaattccaggcaatt
cttccactacgtggtaaaattttgaacgtagaaaaagctagattgcagcgtatatttgaa
aataatgaaattcgatctatgattactgcatttggctgtggtattggtgaagaaatggat
atttccaaacttcgttatcataaaattattatcatgaccgatgccgatgtcgatggtgcg
catatttgtacattgatgttaactttcttctatcgttatcttcgtccaatcattgaaggt
ggttatgtatatattgcaatgcctccattgtttaagcttcaaaaaggacagcgtgtagag
tatgtttatgatgaagcaggtcgtgatgaaatcttggcacaaatgggtgaaaatgttaat
attcagcgatacaaaggtcttggagaaatgaatccagagcagttatgggaaactacaatg
gatccaaatgttcgtaccttaaaacaggtaaatattgatgatgcaatggttgcggattct
gtatttgaaatgctgatgggagaagaagttgctcctagacgtgaatttattcaggaaaat
gccgtttatgcggatatagatatttaa
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