Amedibacterium intestinale JCM 30884: Aargi30884_24140
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Entry
Aargi30884_24140 CDS
T06426
Name
(GenBank) non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
aarg
Amedibacterium intestinale JCM 30884
Pathway
aarg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aarg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Aargi30884_24140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aarg03400
]
Aargi30884_24140
DNA repair and recombination proteins [BR:
aarg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Aargi30884_24140
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ribosomal_L33
Spem1
Motif
Other DBs
NCBI-ProteinID:
BBK23511
UniProt:
A0A6N4TLR5
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All DBs
Position
2437352..2438146
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AA seq
264 aa
AA seq
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MAVAHKGAISFGLVHIPVSLYRTTQDTSIAFHQLCKDTHERIKYKKYCAHCGKEVHSEDI
VKGYEYEKDKYVVMSKEELEEIKTEKDKTIHILQFVKLEEVDAIYYEKNYYAFPDKHAEK
AYELLRKAMFDKGVVAISKTVIGTKETLLALCPDKQGILVKTLFYEEEIVEMPKDIPHPK
TVKAELDMAKQLIQSMTKPFDPSLYHDEYQEKLRKAILSKVEGKEVVEASSKKETISSPM
DLMEALTKSLATMNKPAKRKAVRH
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgcacataaaggggcgatatcttttggacttgttcatattccagtatcttta
tatcgaacaacacaggatacatcgatagcgtttcatcagttatgtaaggatacacatgag
cgtattaaatataaaaaatattgtgcgcattgtggaaaagaagtacatagtgaggatatc
gtaaaaggatatgagtatgagaaagataaatatgtagttatgagtaaagaggagttagag
gaaataaaaacagagaaggataaaacgattcatatcttacagtttgtaaaacttgaagaa
gtagatgctatttattatgagaaaaattattatgcatttcctgataagcatgcagagaag
gcctatgagttgcttagaaaagcgatgtttgataagggtgttgtagcaatatcgaaaacg
gtaataggtacaaaggagactttgcttgctttatgtcctgataagcaggggattttagtt
aaaaccttgttttatgaagaagaaatagtagaaatgccaaaagatatccctcatcccaaa
acggtaaaggctgaattagatatggcaaagcagttgatacagtctatgacaaaacctttt
gatccttctttatatcacgatgaatatcaagaaaagctaagaaaggcaattttatctaaa
gtagaagggaaagaggtagtagaggcaagttctaagaaggaaacgatatctagtccaatg
gatttgatggaagctttaacaaaatcattagcaaccatgaataaaccagcaaaaagaaag
gcggtacgtcattga
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