Agrobacterium arsenijevicii: AB1J11_000230
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Entry
AB1J11_000230 CDS
T11787
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
aars Agrobacterium arsenijevicii
Pathway
aars00300
Lysine biosynthesis
aars01100
Metabolic pathways
aars01120
Microbial metabolism in diverse environments
aars01230
Biosynthesis of amino acids
Module
aars_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
aars00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AB1J11_000230 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aars01002
]
AB1J11_000230 (dapE)
Enzymes [BR:
aars01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
AB1J11_000230 (dapE)
Peptidases and inhibitors [BR:
aars01002
]
Metallo peptidases
Family M20
AB1J11_000230 (dapE)
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Paralog
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Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
XEN00480
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All DBs
Position
1:complement(46147..47343)
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AA seq
398 aa
AA seq
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MTTTDPVANLAALIRCPSVTPAEGGALSLLDTLLSPLGFAVEKMVATEAGTPDVENLYAR
LGTEGPHLMFAGHTDVVPVGDEAAWSHPPFAAEIAGGEMFGRGAVDMKGGIACFVAAIAR
HIEKHGKPQGSVSFLITGDEEGPSINGTSKLLEWAAARGERWDACVVGEPTNPDQLGDMI
KIGRRGSLSGHITVHGVQGHAAYPHLADNPIRGLLQLTQALMHPPFDHGTDDFQPSNLEV
TTIDTGNAATNVIPARATASFNIRFNDSWTAESLRAEIIRRLDAAAAEGELRPDRSPARY
EIVWADRPAHVFLTRNNALISSLSGAVEAVTAKEPKLSTTGGTSDARFIKDYCPVVEFGL
VGQTMHMVDERVAVADLETLTRIYETFIERWFAHADGK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgaccgatcccgttgccaatctcgccgccctcatccgttgcccttcggtgacg
cccgccgaaggtggtgcgctgtcgctgctcgacaccctgctttcaccgctcggctttgcg
gtggaaaaaatggtggcgacggaagcgggaacgcctgatgtggagaacctctacgcccgg
ctcggcacggaaggaccgcatctgatgtttgcgggccataccgacgtcgtgccggtgggt
gacgaggccgcatggagccatccgccctttgcggctgaaatcgccggcggcgaaatgttt
ggccgtggtgccgtggacatgaagggcggtatcgcctgtttcgtcgccgccattgcccgc
cacatcgaaaagcatgggaaaccgcaagggtcggtttccttcctgattaccggcgacgag
gaaggtccgtcgatcaacggcacctccaagcttctggaatgggccgccgccaggggcgag
cgatgggacgcctgcgtggtgggcgagcccaccaacccggaccagctgggcgacatgatc
aagataggccgccggggatcgctttccggccacatcaccgtccatggtgttcagggtcac
gccgcctatccgcatctggccgacaaccccattcgtggactgctgcaactgacgcaggcg
ctgatgcatccgcccttcgatcacggcaccgacgatttccagccttccaatctggaagta
acgaccatcgacaccggcaatgcggccaccaacgtgatcccggcgcgggcgacggcgtcg
ttcaacatccgtttcaacgacagctggacggcggaaagcctacgggcggaaatcatccgc
cgtctcgatgccgctgctgccgaaggtgagctgcgtcccgaccgcagccccgccagatac
gagatcgtctgggcggaccgtccggcccatgtcttcctgacacgcaacaatgcgctcatc
tcgtcgctttccggcgccgttgaggccgttacggccaaggagccgaagctctcgaccacc
ggcggcacgtcggatgcgcgcttcatcaaggattattgccccgtcgtggaattcggtctc
gtcgggcagaccatgcatatggttgatgaacgcgtggctgttgccgatcttgagacgctg
acacgcatctacgagacctttatcgaacgctggttcgctcatgccgacggcaagtga
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