Agrobacterium arsenijevicii: AB1J11_008020
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Entry
AB1J11_008020 CDS
T11787
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aars Agrobacterium arsenijevicii
Pathway
aars03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aars00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AB1J11_008020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aars03021
]
AB1J11_008020
03400 DNA repair and recombination proteins [BR:
aars03400
]
AB1J11_008020
Enzymes [BR:
aars01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AB1J11_008020
Transcription machinery [BR:
aars03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AB1J11_008020
DNA repair and recombination proteins [BR:
aars03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AB1J11_008020
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
IDH
Motif
Other DBs
NCBI-ProteinID:
XEM99290
LinkDB
All DBs
Position
1:complement(1658173..1659183)
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVEFTSSSRTKATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDSKRMVVRKQGPGAVTAGDIQTVG
DIEILNPDHVICTLDEGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLIMTIETNGSVSGEDAVAFAARILQDQLGVFVNFDEPQKEAEE
ESVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattcagaagaactggcaggaacttatcaagccgaacaaggtcgagttcacctcgtcc
agccgcaccaaggcaacgctcgttgccgagccgctggagcgtggtttcggcctcaccctc
ggcaacgcgctgcgtcgcgttctgttgtcttctctgcgtggtgccgctgtgacggccgtg
cagatcgacggtgttctgcacgaattctcctccattcccggcgttcgggaagacgtgacg
gatatcgtgctcaacatcaaggaaatcgccatcaagatggatggtgacgattccaagcgc
atggtcgtgcgcaagcagggcccaggtgccgttaccgctggtgacatccagacggttggc
gacatcgagatcctgaaccccgaccacgtgatctgcacgctggacgaaggcgctgaaatc
cgcatggaattcaccgtcaacaacggcaagggttacgtaccggctgaacgcaaccgcgcg
gaagatgccccgattggcctcattccggtggacagcctctattctccggtcaagaaagtg
tcctacaaggtggaaaacacccgtgaaggccaggttctcgactatgacaagctgatcatg
acgatcgagaccaacggttcggtttccggcgaagacgccgttgccttcgccgctcgtatt
cttcaggaccagctcggcgtcttcgtcaacttcgacgagccgcagaaggaagcagaagaa
gaatcggttaccgaactcgcgttcaacccggcgcttcttaagaaggtcgacgagctcgag
ctgtcggttcgttcggctaactgcctgaagaacgacaacatcgtctatatcggcgacctg
atccagaagaccgaagccgaaatgcttcgcacgccgaactttggtcgcaagtcgctgaac
gaaatcaaggaagttctcgcttccatgggtctgcacctcggtatggaagtaccggcatgg
ccgcctgagaacatcgaagatctcgccaagcgttacgaagatcaatactaa
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