Agrobacterium arsenijevicii: AB1J11_011900
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Entry
AB1J11_011900 CDS
T11787
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
aars Agrobacterium arsenijevicii
Pathway
aars00300
Lysine biosynthesis
aars00470
D-Amino acid metabolism
aars01100
Metabolic pathways
aars01110
Biosynthesis of secondary metabolites
aars01120
Microbial metabolism in diverse environments
aars01230
Biosynthesis of amino acids
Module
aars_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
aars00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AB1J11_011900 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AB1J11_011900 (dapF)
Enzymes [BR:
aars01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AB1J11_011900 (dapF)
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Paralog
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Motif
Pfam:
DAP_epimerase
DUF8394
Motif
Other DBs
NCBI-ProteinID:
XEN00020
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All DBs
Position
1:complement(2473530..2474432)
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AA seq
300 aa
AA seq
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MANTVEFAKMNGLGNKILVVDMRGRKDMVTPDAAIALNADPATQFDQIMAIHDPRVSGTD
AFIDILNCDGTKAQACGNGTRCVVQALSSETGKTTFTFQTVAGILNAVEHEDGMISVDMG
LPRFRWSDIPLSEEFHDTSRIELQIGPIDAPILHSPAVMSMGNPHAIFWVDRDPMDFDLE
RFGPLLENHPMFPEKANITLAQVISDSALRTRTWERGAGLTLACGSAACAAAVSAARTGR
TGRKVTIDVASSPVRVPLTIDWREDNHVIMTGPAEWEWSGMVDPVTGVWSRDAAAEQGAV
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatacggtcgaatttgcgaagatgaacgggcttggcaacaagatcctcgttgtc
gacatgcgcggccgcaaggatatggtgacgcctgacgcggcaatcgcgctcaatgccgat
ccagccacgcagttcgaccagatcatggcgatccacgatccgcgtgtcagcggcaccgat
gccttcatcgatattctcaattgcgatggcacgaaggcgcaggcctgcggcaacggcacg
cgctgcgtggtgcaggccctgtcctcggaaacgggcaagactaccttcaccttccagacg
gtggcgggcatcctcaacgccgtcgaacatgaagacggcatgatatcagtcgatatgggc
ctgccgcgtttccgctggagcgatattccgctttccgaagaattccacgatacgagccgc
atcgaattgcagatcgggccgattgatgcgccgatcctgcattcgcccgccgtcatgtcc
atgggcaacccgcacgccattttctgggtggatcgcgatcctatggatttcgatctggag
cggttcgggccgcttctcgaaaaccacccgatgtttccggaaaaggccaatatcacgctg
gcgcaggttatttccgacagtgcgcttcgcacgcgcacctgggagcgcggcgccgggctt
acgctcgcctgcggttccgccgcctgcgctgccgccgtttccgccgcccgtaccggccgc
acgggcaggaaggtcaccatcgatgtcgcctccagccccgtgcgtgtgccgctgaccatc
gactggcgcgaggacaaccatgtcatcatgaccgggccggccgaatgggaatggtccggc
atggtcgatcccgttaccggcgtctggtcgcgtgatgcggcggccgaacagggggccgta
tga
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