KEGG   Agrobacterium arsenijevicii: AB1J11_012570
Entry
AB1J11_012570     CDS       T11787                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
aars  Agrobacterium arsenijevicii
Pathway
aars03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aars00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AB1J11_012570 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aars03021]
    AB1J11_012570 (rho)
   03019 Messenger RNA biogenesis [BR:aars03019]
    AB1J11_012570 (rho)
Transcription machinery [BR:aars03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     AB1J11_012570 (rho)
Messenger RNA biogenesis [BR:aars03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     AB1J11_012570 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_22 AAA_25 S1CSD-TOTE-2 NACHT DUF6360 AAA
Other DBs
NCBI-ProteinID: XEN00144
LinkDB
Position
1:complement(2633803..2635068)
AA seq 421 aa
MAEMKLQELKSKSPTDLLTFAESLEVENASTMRKQELMFAILKVLASQDIEIIGEGVVEV
LQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRGPKEGERYFALLKVN
TINFDDPEKIRHKVHFDNLTPLYPNERFKMELELPTTKDLSSRVIDLVAPLGKGQRGLIV
APPRTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAV
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA
LDILKSGTRKEDLLVPRQDLQKIFVLRRILAPMGTMDAIEFLIDKLKQTKTNSDFFESMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggctgaaatgaagcttcaggaacttaagagcaaatcgcctaccgacttgctgactttt
gccgaatccctggaagttgaaaatgcgagcaccatgcgcaagcaggagcttatgttcgca
atcctcaaggttctcgcgagccaggacatcgaaattatcggcgaaggcgtcgttgaagtc
ctgcaggacggtttcggtttcctgcggtctgcaaacgcaaattatctgcccggtccggac
gatatctatatttcgccgtcacagatccgccgcttctcgttgaagaccggcgatactgtc
gaaggcccgatccgtggacccaaggaaggcgaacgttacttcgctcttctcaaggtcaac
acgatcaacttcgatgatccagaaaaaatccgtcacaaggtccacttcgataatctgacg
ccgctttatccgaatgagcggttcaagatggagctggaacttccgacaacgaaggatctg
tcttcgcgggtaatcgatctggtcgcgccactcggcaagggccagcgtggattgatcgtc
gctccgccgcgtaccggtaaaacggtactgttgcagaacatcgcccattccatcacggcg
aaccatccggaatgttacctgatcgttcttctgatcgacgaacgcccggaagaagtcacc
gacatgcagcgttcggtgaagggtgaggttgtgtcctccaccttcgacgaacccgctgta
cgccacgtccaggtcgcggaaatggtcatcgaaaaggcgaagcgccttgtcgaacacggc
cgtgacgttgtcatcctgctcgattccattacccgccttggccgcgcctataacacggtc
gttccgtcttccggcaaggttctgaccggtggtgtggatgccaacgcgctgcagcggccg
aagcgtttcttcggtgccgcgcgtaacatcgaagaaggtggttcgctgacgattatcgcg
accgcgctgatcgacaccggcagccgtatggacgaagtgatcttcgaagaattcaagggt
acgggcaactcggaaatcgttctcgatcgcaaggtcgcagacaagcgcatcttcccggcg
ctcgatattctgaagtccggtacgcgtaaggaagacctgctcgtgccgcgtcaggacctg
cagaagatcttcgtgcttcgccgaattcttgctcctatgggaacgatggacgccatcgag
ttcctgatcgacaagctgaagcagaccaagaccaactcggatttcttcgaatccatgaat
acctga

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