Agrobacterium arsenijevicii: AB1J11_013110
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Entry
AB1J11_013110 CDS
T11787
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aars Agrobacterium arsenijevicii
Pathway
aars03030
DNA replication
aars03410
Base excision repair
aars03420
Nucleotide excision repair
aars03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aars00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB1J11_013110 (polA)
03410 Base excision repair
AB1J11_013110 (polA)
03420 Nucleotide excision repair
AB1J11_013110 (polA)
03440 Homologous recombination
AB1J11_013110 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aars03032
]
AB1J11_013110 (polA)
03400 DNA repair and recombination proteins [BR:
aars03400
]
AB1J11_013110 (polA)
Enzymes [BR:
aars01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB1J11_013110 (polA)
DNA replication proteins [BR:
aars03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AB1J11_013110 (polA)
DNA repair and recombination proteins [BR:
aars03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AB1J11_013110 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB1J11_013110 (polA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
IMS_HHH
Transposase_20
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
XEN00242
LinkDB
All DBs
Position
1:2750924..2753911
Genome browser
AA seq
995 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVSGFCNMLWKLLKDARNTDVGVT
PTHFAVIFDYSSKTFRNELYDLYKANRTAPPEDLVPQFGLIREATRAFNLPCIETEGFEA
DDIIATYARQAEAIGADVTIISSDKDLMQLVTANVHMYDAMKDKQIGVPDVVEKWGVAPE
KMIDLQAMTGDSTDNVPGIPGIGPKTAAQLLEEYGDLDTLLARAGEIKQQKRRENIIANA
ELARLSRQLVALRTDVPLQQSLEELVLEPQNGPKLIAFLKAMEFTTLTRRVAEATDSDAS
AIEPANVPVQWGADAHGPDLDASPVAVTADETAGASASPVAPARKMAAEGSTPADLTTAR
QTVFAAAKIDTTAYTTIRDLAELDRWVAAARETGVVAFDTETTSLDPMQAELVGFSLAIA
DNGKDASGTDIRAAYVPLTHKTGSGGDLFSDGIKLAEGQVPFAEALERLKDLLEDEAVLK
IAQNLKYDYLLMKRHGVVMQSFDDTMLISYVLEAGKTTHGMDTLSERWLGHTPITYKDVA
GSGKSSITFDFVDIDKATAYAAEDADVTLRLWMVLKPRLAAERLTKVYERLERPLVPVLA
HMEERGITVDRQILSRLSGELAQKAAAFEEEVYQLAGERFNIGSPKQLGDILFGRMGLPG
GSKTKTGQWSTSAQVLEDLAAEGAELPRKIVDWRQLTKLKSTYTDALPGYVHPETKRVHT
SYALASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLLSADYSQIELRVLAHV
ADIPQLRSAFENGIDIHAMTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISAFGLANQL
SIARSEAGEYIKKYFERFPGIRDYMEATKAFARENGYVETIFGRRAHYPEIRSSNPSMKA
FNERAAINAPIQGSAADIIRRAMVRIEPALEAEKLSARMLLQVHDELIFEVEEAEIEKTL
PIVVSVMENAAMPAISMRVPLKVDARAADNWDEAH
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcatctcttcctcgttgacggttccggtttcatcttccgggcgttc
catgccattccgccgctgaaccgcaagtcggatgggctgccggtcaacgccgtttccggc
ttctgcaacatgttgtggaagctcttgaaggatgcgcgcaataccgatgtcggcgtcacg
cccacgcattttgccgtgattttcgactattcgtcgaaaaccttccgcaatgaactttac
gatctctacaaggccaaccgcaccgcgccgccggaggatctggtgccgcaattcggcctg
atccgcgaggcgacccgggccttcaaccttccctgcatcgaaacggaaggctttgaggcg
gacgatatcatcgccacttacgcccgtcaggcggaggcgattggcgccgacgtcaccatc
atctcttccgacaaggatctgatgcagctcgtcacggccaatgtgcatatgtacgacgcc
atgaaggacaagcagatcggcgttcccgatgttgtcgaaaaatggggcgtggctccggaa
aaaatgatcgaccttcaggcgatgaccggcgattccaccgacaatgttcctggtattccc
ggcatcgggccgaagacagccgcgcaattgctcgaagaatacggcgatctcgatacgttg
ctggcgcgtgcgggagaaatcaagcagcagaagcgccgcgaaaacatcatcgccaatgcg
gagcttgcccgcctttcccgacagctcgtggcgctcagaaccgacgtgccgctgcagcag
tctctggaagagctggtgcttgaaccgcagaacggcccgaaactcattgccttcctgaag
gccatggaattcacgacgctgacgcgccgggttgccgaagcgacggatagcgatgcctcg
gccatcgagcctgccaatgtgccggtgcaatggggtgctgacgcccatggtcccgacctt
gatgcatcgcctgtggctgtcacggctgacgaaacggccggcgcatcggcttcgcctgtt
gctccggcaaggaagatggcggcggaaggcagtacgcctgccgatctgaccacggcgcgg
cagacggtattcgccgccgccaagatcgacacaactgcctatacgacgatcagggacctg
gcggaactggaccgctgggttgcagcagctcgcgaaacgggcgtcgtcgccttcgacacg
gaaacgacctcgctcgacccgatgcaggcggaacttgtcggtttttcgctggccattgcc
gataacggcaaggacgcctcgggcaccgatatccgtgccgcctatgttcccctcacacac
aagaccggctccggtggagatcttttcagcgatggcatcaagctcgctgaaggccaggtg
ccgtttgccgaggcgctggaacgtctgaaggacctccttgaggatgaagccgttctgaaa
atcgcgcagaaccttaaatatgattatctgctgatgaagcgccacggcgtcgtcatgcag
agtttcgacgacaccatgctgatttcctacgttctggaggccggcaagaccacgcatggc
atggatacgttgtccgaacgctggctgggccacacgccgatcacctataaggacgtggcg
gggtcgggcaagtcgagcatcaccttcgatttcgtcgatatcgacaaggcgaccgcttac
gctgcggaagacgctgacgttaccctgcggctgtggatggtgctgaagccccggcttgct
gccgagcggctgaccaaggtctatgaacggctggagcgtcctctggtgcctgtactggcg
catatggaggagcgtggcatcaccgtggaccggcagatcctgtcgcgcctctccggcgaa
ctggcccagaaggcagctgccttcgaagaggaagtctaccaactggcgggcgagcgtttc
aatatcgggtcgccaaagcagttgggcgacattctgttcggccggatgggtttgccgggc
ggctcgaaaaccaagaccggccaatggtcgacatcggcgcaggttctcgaagatctggcg
gcggaaggtgccgagttgccgcgcaagatcgtcgactggcggcagctgaccaagctgaaa
tcgacctataccgatgcgctgcccggctatgttcatcctgagacgaagcgggtgcatacg
tcctacgcgctggcctccaccacgacggggcgtctgtcgtcgtcggagccgaaccttcag
aacatcccggtgcgcacagcggaaggccgcaagatccgcactgctttcatctccacgccc
ggccacaagcttctttccgccgactacagccagatcgaactgcgcgtgcttgcccatgtt
gcggatattccgcagcttcgcagcgcattcgaaaacggcatcgacattcatgcgatgaca
gcatcggaaatgttcggggtgccggtggagggcatgccctcggaagtccgtcgccgcgcc
aaggccatcaacttcggcatcatctacggtatttccgctttcggccttgccaaccagctc
agcatcgcccgctccgaagcgggtgagtatatcaagaaatatttcgagcgttttcccggc
attcgcgactatatggaagcgaccaaagctttcgcccgcgagaacggctacgtcgaaacc
attttcggccgccgcgcccattatccggaaatccgctcctccaatccctcgatgaaagcc
ttcaacgaacgcgcggccatcaatgcgccgatccagggatctgcggccgatatcatccgc
cgcgcgatggtccgtatcgagccggcgttggaggcggaaaagctttccgcccgcatgctg
ctgcaggtgcatgacgaactcatcttcgaagtcgaggaagcggaaatcgaaaagaccctg
cccatcgtcgtctcggtgatggaaaatgcggccatgccggcgatttccatgagggtgccg
ctcaaggtggatgcgcgtgcggccgacaattgggacgaggcgcattga
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