Agrobacterium arsenijevicii: AB1J11_015415
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Entry
AB1J11_015415 CDS
T11787
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
aars Agrobacterium arsenijevicii
Brite
KEGG Orthology (KO) [BR:
aars00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aars03036
]
AB1J11_015415 (xerD)
Chromosome and associated proteins [BR:
aars03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
AB1J11_015415 (xerD)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
HTH_MmpR5
MP31
DUF7553
Motif
Other DBs
NCBI-ProteinID:
XEN02132
LinkDB
All DBs
Position
2:complement(249701..250696)
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AA seq
331 aa
AA seq
DB search
MSGQAMGGRDGARLESFLEMMSAERGAAANTLSSYERDLSDLREFLGGRGQSLMEAATAD
LSAYLTHLSTQGFAATSQARRLSSMRQFYRFLYSEGLRGDDPTGTIDAPKKGLTLPKTMS
VADVTKLLGIAAEEAALTGPGQLARIRMHLLLELLYATGMRVSELVSLPVKVLRQEGRFL
MIRGKGNKDRMVLLSRTAIEAMEKYDAARKSLVPEKSKTPAPQKKTDSPDSPWLFPSNSK
EGHLPRQVFARDLKDIAIRAGLNPSAVSPHVLRHAFASHLLQNGADLRAVQELLGHSDIS
TTQIYTHVLEERLQELVQTHHPLAKQGKNLD
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtcaagcgatgggcgggcgagacggcgcgcggctcgaaagttttctggaaatg
atgagcgccgaaaggggtgccgccgccaatacgctctcttcttacgaacgcgacctttcc
gatctgcgtgaatttctcggtggccgaggccagtccttgatggaagccgccacggcagac
ctgtcggcctatctgacccatctttccactcagggctttgcagccacgtcgcaggcaaga
cgcctgtcttccatgcggcaattctaccggttcctctattctgaaggacttcgcggcgac
gacccgaccggtaccattgatgcgcccaagaagggcctcaccctgcccaagacgatgagc
gtcgcggacgtgacaaaacttcttggcatcgctgctgaagaggccgccttaaccggcccc
ggccagcttgcccgcatccgtatgcatctgctgctcgaactgctctatgccaccggcatg
cgtgtcagcgaactcgtttccctgccggtgaaagtgctgcgccaggaaggccgcttcctg
atgatccgtggcaagggcaacaaggaccgcatggtccttctgtcccgcacagccatagag
gcgatggaaaaatacgacgccgccagaaaatcgctcgtgccggagaaaagtaagacgccc
gcgccgcagaaaaaaacggacagtcctgatagcccctggctgtttccttcgaacagtaag
gaaggacatctgccgaggcaggttttcgcacgcgacctcaaggacattgccattcgcgcg
ggccttaatccttcggcggtgtcgccgcatgtcctgcgtcacgcctttgccagccacctt
ctgcagaacggcgcggacctgcgcgccgtgcaggaactactcggccattccgacatttcc
acgacacaaatctatacacatgtgctggaagaacgcctgcaagagctggtacaaacacat
cacccccttgccaaacagggcaaaaaccttgattag
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