Actinobacillus arthritidis: NYR89_00945
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Entry
NYR89_00945 CDS
T09025
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
aart
Actinobacillus arthritidis
Pathway
aart03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aart00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NYR89_00945 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aart03019
]
NYR89_00945 (pcnB)
Enzymes [BR:
aart01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
NYR89_00945 (pcnB)
Messenger RNA biogenesis [BR:
aart03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NYR89_00945 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
DUF2204
Motif
Other DBs
NCBI-ProteinID:
WGE89558
LinkDB
All DBs
Position
187471..189003
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AA seq
510 aa
AA seq
DB search
MFSRQKKGKKQPLTEQNLSEVKSEKRVKAVESQTKSKRSAPTLSERPQRSSQKSKKNSDV
PSHLLHKKFTVSGGHYDITPKDFPKNALAIVEKLQRAGFEAYVVGGCIRDLLLGHKPKDF
DVATNAKPEEIQKIFGRQCRLIGRRFRLAHIVFGRDIYEVATFRADHSNHSSDKISKVSE
EGMLLRDNVYGTLREDAQRRDFTVNSLYYDPKHNLIFDFFDGIADLKAGKLRLIGDPVVR
YQEDPVRMLRAVRFMAKLDMFLDKPSDAPIRELAYLLKNIPAARLFDESLKLLQSGQGFK
TYQLMRQYGLFEQLFPVLVPFFTEHNDSNAERMLSKALNSTDERIRDNLRVNPAFLFAAL
LWYPLREKMEVLKNEGGLNSHDAMMLAANDVLDESCKAIALHRRHTSVIRDIWALQFQMT
KRSGKRPQQTLEHIKFRAGFDLLVMRAEIEGGDLVELSAWWHEYQFSNDAQRAEMLKAVR
NLPNFAGEEKKKRRRKIFRKKKPVKKVSAE
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
ttgttttctcgacaaaaaaaaggaaaaaaacaaccgcttacagaacaaaacttgtctgaa
gtaaaatcggaaaaacgtgttaaagcggtagaatctcaaacaaaatccaagcgttctgct
ccgacattgagtgagcgacctcagcgttcttctcaaaaatctaaaaaaaattcagatgtt
ccttctcatttactgcataaaaaatttacggtaagtggtggtcattatgatattacgccg
aaagattttcctaaaaatgcgttagcaattgttgaaaaattacaacgtgccggttttgaa
gcgtatgtggttggtggttgtattcgagatttattacttgggcataaacccaaagatttt
gacgtggcaaccaatgcaaaaccggaagaaattcaaaaaatctttggtcgtcaatgccgt
ttaatcggacgacgtttccgtttagcccatattgtgtttggacgtgatatttatgaagtc
gcaactttccgagcggatcacagcaatcatagcagtgataaaatctcgaaagtgagcgaa
gaaggtatgctgttacgtgacaatgtgtatggtacattacgtgaagacgcacaacgccgt
gatttcacggtgaactcgctttattatgatccgaagcataatctgattttcgatttcttt
gatggtattgcggatttgaaagccggtaagttacgcttaatcggtgatccggtggtacgc
tatcaagaagatccggtacgtatgttacgtgcagttcgctttatggcgaaattggatatg
ttcttggataaaccgagcgatgcccctattcgtgaacttgcctatttattgaaaaatatt
ccggcggcacgtttgtttgatgaatcattaaaattgttgcaatcgggacaaggttttaaa
acctatcagttgatgcgtcaatatggcttattcgagcagttattcccggtgcttgttcct
tttttcaccgaacacaatgattcgaatgcagagcgtatgctaagtaaagcacttaactca
acggatgagcgtattcgtgataatttacgggttaatcctgcatttttatttgcggccctt
ctttggtatccattacgtgagaaaatggaagtgctaaaaaatgaaggtggtctaaacagc
catgatgcaatgatgttagcggctaatgatgtattggatgaaagctgtaaagccattgcc
ttacatcgccgtcatacctctgtgattcgtgatatttgggcgttacaatttcagatgact
aagcgttcgggtaagcgtccacagcagacgctagaacacataaaattccgtgctggtttt
gatttattagtgatgcgtgctgagattgaaggtggtgacttggtcgagctttcagcgtgg
tggcacgaataccaatttagcaatgacgcacaacgtgcggaaatgttgaaagcggtcaga
aatttgccgaattttgccggcgaagaaaagaaaaaacgtcgtcgtaaaatatttagaaag
aaaaagccggtgaagaaagtctcggcagagtaa
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