Actinobacillus arthritidis: NYR89_02120
Help
Entry
NYR89_02120 CDS
T09025
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
aart
Actinobacillus arthritidis
Brite
KEGG Orthology (KO) [BR:
aart00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aart03021
]
NYR89_02120 (rapA)
Transcription machinery [BR:
aart03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
NYR89_02120 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
WGE89742
LinkDB
All DBs
Position
426748..429657
Genome browser
AA seq
969 aa
AA seq
DB search
MFVIGQRWISESENNLGLGIVTASDNRTVTIQFPAAEEERIYALSVAPLTRVQFQKGDRI
NSVEGWQLDVEEVVENQGVIIYLGKRTDSGEETVLPEMQLDHKVSFSKPQDRLFSAQIDR
SDRFALRYRALQHQQAQFQSPLRGMRGIRASLIPHQLHIAKEVGQRVAPRVLLADEVGLG
KTIEAGMILQQQLFSGRVERVLVLVPESLQHQWLVEMLRRFNLKFSLFDEERCADFDKAD
EDGNDVSENPFDSEALVIASIDWLESSPNRAKQVLASNWDMLIVDEAHHLAWSENEPSVG
YQFVEQLSKQTPSVLLLTATPEQLGQESHFARLALLDSDRFYDYHSFVAEQKDYKPVADA
VATLLNDKPLSHDEQNSIAELLSEKDTEPMFKVINSEKSKENDRLQVRQELIRELIDRHG
TSRVLFRNTRQGVKGFPHRVYHQITLEMPSQYTNALKVMGMMGGVTKDDQLYPERLFQRM
NPAAKWADFDPRIEWLITFLKNHRDEKILVICKQADTAIALEQILREREAIRSAVFHEKM
SIVERDRASAYFAQMEEGAQVLISSSIGSEGRNFQFASNLVLFNLPDNPDLLEQSIGRLD
RIGQKNDIQIHVPCFENSMQMILATWYHQGLNAFEETCPMGTALFREFGEELEIFLKNPQ
AVGFDEFLAKTFKRQQQLKAELEQGRDRLLELNSNGGEVAQELAEAIAKEDNNPHLVNFA
LSLFDVIGLEQEDLGEQSIVISPTGHMLVPDFPGIAEDGTTVTFDRQLALMREDVEFLTW
DHPMIRNGIDLITSGDIGKSAISLLINKNLPAGTLLLEAIYMVETQAPKGLNLTRFLPPT
PVRILLDNKGNDMAAQVSFAGLEKQLKPVNKQMANKIAKMAQADIKKLISISEQKIAVKL
PELIEKASQEADSILSAELQRLTSLQAVNKNIRADEIEALEQQRVESLNQIALANWRLDS
LRVIVSNKE
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtaatagggcaacgctggatcagcgaatcagaaaataatttaggtttagggatt
gtgacggcaagtgacaatcgtactgttaccattcaattcccggcggcagaggaagagcgt
atttatgcactttcggttgcacctttaacacgtgtgcaatttcaaaaaggtgatcgcatt
aatagtgtggaaggttggcagttagatgtcgaagaggttgttgagaaccaaggggttata
atctatttaggtaaacgaacggattccggtgaagaaaccgtattacctgaaatgcagtta
gaccataaagtgagcttcagcaagccacaagaccgtttattttcagcacagattgatcgt
tccgaccgttttgccttacgttatcgggcattacaacatcaacaagcacaatttcaatcg
ccgttacgtggaatgcgaggcattcgtgcgagcttaattccgcaccaattacatattgct
aaagaagtcggacagcgtgttgcacctcgtgtgttattagcggatgaagtcggtttaggt
aaaaccattgaagcagggatgattttacagcaacagcttttctcaggtagagttgagcgt
gtattagtgcttgtgccggaaagtttgcaacatcaatggctagttgaaatgttacgccgt
ttcaacttgaaattctcattatttgatgaagaacgttgtgccgattttgataaagcggat
gaagacggtaatgatgtcagcgaaaatccgtttgatagcgaagcgttagtgatcgcttca
atcgactggttagaaagttcaccgaatcgagctaaacaagtattggcaagcaattgggat
atgctgatcgtggatgaagcacatcacttagcatggtcggaaaacgaaccgagtgttggt
tatcaatttgttgagcagttatcaaaacaaactccatcagtattgcttctcactgcaacg
cctgagcaattaggacaagaaagccattttgcccgtttagcattattggattcagatcgt
ttctatgattaccacagctttgttgccgaacaaaaagattacaaaccggtagcggatgcg
gtcgcgactttattgaatgataaaccgttaagtcatgacgaacaaaatagcattgccgaa
ttactgagcgagaaagatactgaaccgatgtttaaggtgattaatagcgaaaaatcgaaa
gaaaatgaccgcttgcaagtgcgtcaagaattgattcgtgagctgattgaccgccacggt
actagccgagtgttattccgtaatactcgtcaaggtgtgaaaggtttcccacatcgtgtt
tatcatcaaattaccttggaaatgccgagtcaatataccaatgcgttaaaagtgatgggg
atgatgggcggtgtaaccaaagatgatcagctttatccggaacgtttattccaacgtatg
aatccggcggcaaaatgggcggattttgaccctcgtatcgaatggttgattactttcttg
aaaaatcatcgtgacgagaaaattttagtcatttgtaagcaagcggatacagcgattgca
cttgagcaaattttacgtgaacgtgaagcgattcgttcggcggtgttccacgaaaaaatg
tcgattgtagaacgagacagagcttccgcttatttcgcacaaatggaagagggcgctcag
gtcttgatcagttcaagtatcggatcggaagggcgtaacttccagtttgccagcaattta
gtgttgttcaatttaccggataatccggacttattggaacaaagtatcggacgtttagac
cgtatcggtcagaaaaatgatattcagattcacgtaccgtgctttgaaaattcaatgcag
atgatattggcgacttggtatcatcaaggtctaaatgcgtttgaagaaacttgcccgatg
ggcacagcattattccgtgaattcggcgaagagttggaaatcttcctgaagaacccgcaa
gcggtcggatttgacgaatttcttgcaaaaacctttaagcgccaacaacagttgaaagcg
gaattagagcaaggtcgagatcgtttacttgagctaaattcaaatggcggtgaagtggca
caggaactcgctgaagcgattgcgaaagaagacaataacccgcatttagtcaattttgct
ttgagtttatttgatgttatcggcttagagcaggaagatttaggtgagcaatctatcgtg
attagcccgaccggtcatatgcttgtaccagatttcccgggcattgcggaagacggtacg
acagtcacctttgatcgtcagcttgccttaatgcgagaagatgttgagtttttaacctgg
gatcacccaatgattcgtaacggtattgatttgattacttccggcgatatcggtaaatcg
gcaatttcgttactgattaataaaaacttaccggcaggtactttattgcttgaagcaatt
tatatggtggaaacacaagcaccgaaaggtttgaatctgactcgtttcttaccgccaaca
ccggtacgtatcctattagataataaaggtaacgatatggcggctcaggtgtcgtttgca
gggcttgagaagcagttaaaaccggtgaataaacaaatggcaaataaaattgcgaaaatg
gcacaagcggatattaaaaaattaattagtatcagcgagcaaaaaatcgcagtcaaatta
ccggaattgattgaaaaagccagccaagaagcggatagtatcttaagtgcggaattacag
cgtttaacctcgttacaagcagtaaataaaaacattcgtgccgatgaaattgaagcattg
gaacaacagcgtgtcgaatcgctgaatcaaattgcattagcgaattggcgtttagatagc
ttacgtgtcattgtaagtaataaagaatag
DBGET
integrated database retrieval system
