Actinobacillus arthritidis: NYR89_03085
Help
Entry
NYR89_03085 CDS
T09025
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aart
Actinobacillus arthritidis
Pathway
aart03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aart00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NYR89_03085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aart03019
]
NYR89_03085
03009 Ribosome biogenesis [BR:
aart03009
]
NYR89_03085
Enzymes [BR:
aart01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NYR89_03085
Messenger RNA biogenesis [BR:
aart03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NYR89_03085
Ribosome biogenesis [BR:
aart03009
]
Prokaryotic type
rRNA helicases
NYR89_03085
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
DRTGG
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WGE89894
LinkDB
All DBs
Position
complement(625347..627191)
Genome browser
AA seq
614 aa
AA seq
DB search
MTTHSLTFADLGLPQSILNAVNDMGFVTPSPIQQETIPHLLAGRDVLGMAQTGSGKTVAF
ALPLLAQIDPSKRHPQMLVMAPTRELAIQVADACEQFTKNMKGINVVTVYGGQRYDIQLR
ALKQGSQVVVGTPGRILDHIRRGTLDLSALQAIVLDEADEMLRMGFIDDVETVMAELPEN
HQTALFSATMPEPIRRITRRFMKDPQEVKIQATQRSAPDITQSYWLVNGFRKNDALLRFL
EVEEFDATIIFTRTKTGTIDITELCERNGYRTATLNGDMTQQAREQTLDKLKSGRLDILV
ATDVATRGIDIERISLVVNFDIPLDAESYVHRIGRTGRAGRSGRALLFVEPRERRLLRNI
EHLMKKPIDEVAIPNHEILMEKRREKFKARVSKQLEHHDLEKYRELLEDLFTADQDHEEL
AAMMMMLQEKQKLILPPDPEVRARRGERGRRDRDDHRSGREERRGGREHRENSGVAMDLY
RIELGREDGVEVRHIVGAIANEGDISSRYIGHIKLHDTYSTIELPQGMPNHIVQHFAQKA
RVLNKQMQMSLLGPAGGVNSQPFEERRGGGRNDRNDRRGDRGGHSDRREGGFNDRKKGGF
KEKRFNDKGRTRRD
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgacaactcattctttaactttcgcagaccttggtcttcctcaatctattcttaacgct
gtaaacgatatgggattcgtgaccccatcaccaattcagcaagaaaccattccgcattta
ttggcgggtcgtgatgtactcggtatggcacaaaccggtagcggcaaaacagtcgcattc
gctttacctttattagcacaaatcgatccatctaaacgtcatccacaaatgttagtgatg
gcacctactcgtgaattagcaatccaagttgctgatgcctgcgaacaatttacgaaaaat
atgaaagggattaatgtggtaaccgtttacggtggtcaacgttacgacattcaattgcgt
gctttaaaacaaggctcacaagtggttgtgggtacaccaggccgtattcttgaccatatt
cgtcgtggcacattagatttatctgcattacaagccatcgtattagacgaagcagacgaa
atgttacgtatgggctttattgatgatgttgaaaccgtgatggctgaattaccggaaaat
caccaaactgctctcttctctgcaacgatgccagaaccaattcgccgtattactcgtcgc
tttatgaaagatccgcaagaagtgaaaatccaagcgactcaacgttctgcaccggatatc
actcaaagttactggttagtaaatggcttccgtaaaaatgatgcgttattacgtttctta
gaagtagaagaatttgatgcgacaatcatctttactcgtaccaaaaccggcacgattgat
attaccgaattatgtgaacgtaacggttatcgtacagcaacattaaacggtgatatgact
cagcaagcgcgtgagcaaacgttagataaattaaaatcaggtcgtttagatatcttagta
gcaaccgacgtagcgactcgtggtatcgatattgaacgtatcagccttgtcgtaaacttt
gatattccattagatgcggaatcttatgtacatcgcatcggtcgtactggtcgtgctggt
cgttctggtcgtgcgttattattcgtagaaccgcgtgaacgccgtttactgcgtaatatc
gaacatttaatgaaaaaaccgatcgatgaagtggcaattccaaatcacgaaattttaatg
gaaaaacgtcgtgagaaatttaaagcacgtgtttctaaacaattagaacatcacgattta
gaaaaatatcgtgaattacttgaagatttattcaccgcagaccaagaccacgaagaattg
gcggcaatgatgatgatgcttcaagagaaacaaaaattaattcttccgcctgatccggaa
gttcgtgcaagacgcggtgaacgtggtcgcagagatcgagatgatcaccgtagtggacgt
gaagaacgtcgtggtggtcgtgaacatcgtgaaaatagcggtgttgcaatggatttatat
cgcatcgaattaggtcgtgaagatggtgtggaagtgcgtcatatcgtcggtgctattgct
aacgaaggcgatattagtagtcgttacatcggtcacattaaattacacgatacttactct
accattgagttaccgcaaggtatgccgaaccacatcgtgcaacactttgctcaaaaagca
cgtgtgctaaataaacaaatgcaaatgtctttattaggccctgcaggcggtgtcaacagc
caaccgtttgaagagcgtcgtggtggtggtcgtaacgatagaaatgaccgtcgtggagat
cgtggtggtcattctgaccgtcgtgaaggtggttttaacgaccgtaaaaaaggcggtttt
aaagaaaaacgctttaatgataaaggtcgcactcgccgtgactaa
DBGET
integrated database retrieval system
