Actinobacillus arthritidis: NYR89_03675
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Entry
NYR89_03675 CDS
T09025
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
aart
Actinobacillus arthritidis
Pathway
aart03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aart00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NYR89_03675 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aart03400
]
NYR89_03675 (sbcB)
Enzymes [BR:
aart01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
NYR89_03675 (sbcB)
DNA repair and recombination proteins [BR:
aart03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NYR89_03675 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NYR89_03675 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NYR89_03675 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WGE89973
LinkDB
All DBs
Position
complement(769426..770973)
Genome browser
AA seq
515 aa
AA seq
DB search
MNKNLTFFFYDYESFGVSPALDRPAQFAGIRTDSDFNIIGDPVMFYCKQTPDYLPSPEAV
MVTGITPQQCNNEGVPEPEFAVRIHAEFSQPNTCILGYNNIRYDDEMTRYTFFRNFFDPY
EYSWKNGNSRWDLLDLVRACYALRPDGIKWVTDENGVPNFKLENLTKVNGIAHENAHDAM
ADVYATIAMAKLIKQKQPKLFQFFFENRGKKEIEKMIDTGEMTPLVHVSGMFGNARGNAA
WIAPIAWHPTNQNQVLCCDLSGDVSALLTDSAEELRTRLYTKKEELAENVAPVPLKGVHI
NRCPIIAPAKVLLPENAARLGIDRERCLENLKLLKANKSLVREKVTEIFMEERSFEPSAN
VETTLYDGFFSPADKNNMAILRTLPPQELAHHGLQFADERVEALLFHYRARHYPETLSRA
EQIKWQKYCHQQIDAKSAQFAEAIDNLFQIHHDNPEKVKLLEDLTAYLAQIAEFQMVKHT
GNAQSDEQLVSALNQVAEQGVDKAAKLAMLKALIK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaatcttacttttttcttttatgattatgaaagtttcggtgtgagtccggcg
ttagatcgtccggcgcaatttgctggtattcgtactgatagtgattttaacatcatcggt
gatccggtgatgttttattgtaagcaaacaccggattatttaccctcgcccgaagcggtg
atggtaaccgggattactccgcaacaatgtaacaatgagggtgttccagaaccggaattt
gctgtgcgtattcacgctgaatttagccaacctaacacttgcattttaggctataacaat
attcgttatgacgatgaaatgacccgttatacttttttccgtaatttctttgacccgtat
gaatatagctggaaaaacggcaattcgcgctgggatctattggatcttgttcgagcttgt
tacgccctgcgcccggacggaataaaatgggtaacagatgaaaacggtgtaccaaatttc
aaattagagaatttgaccaaagtaaacggcattgcccacgaaaatgcacacgatgcaatg
gcggacgtttatgccacgattgcgatggcaaaattgattaagcaaaaacagccgaaactt
ttccaatttttctttgaaaatcgtggtaagaaagaaattgagaaaatgattgataccggt
gaaatgaccccattagtacatgtttccggtatgttcggtaatgcacgaggtaatgccgca
tggatcgcaccgattgcatggcatccgaccaatcaaaatcaagtgttatgctgtgatctc
tcgggtgatgttagtgccttactgacggattcagcggaagaattacgtacccgtctatac
actaaaaaagaagaattggcggaaaatgttgcacccgtgccattaaaaggcgtacatatc
aaccgctgtccgattattgcgccggcaaaagtgttgttgcctgaaaatgcggctcgctta
ggcattgatcgtgagcgttgcttggaaaatctcaaattactgaaagcgaataaaagttta
gtgcgtgaaaaagtgaccgaaatttttatggaagaacggagttttgagccttctgcgaat
gtggaaaccacgctatatgacggtttcttctcaccggcggataaaaataatatggcgatt
ttacgcacattaccgccgcaagaattggcacatcacggcttacagtttgccgatgaacga
gtagaagctttgttattccattatcgagctagacattatcctgaaacattgagccgagcc
gagcaaatcaaatggcagaaatattgtcatcagcagatagatgccaaatcggcacaattt
gccgaagcgattgataacttattccaaattcatcacgataatccagaaaaggtaaaatta
ttggaagatttgactgcttatcttgctcaaattgctgaatttcaaatggttaaacatacc
ggtaatgcacagagtgatgaacaactggtttcagccttaaatcaagtggcggaacaaggt
gtggacaaagcggcaaaattagcaatgctcaaagcactgatcaaataa
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