Actinobacillus arthritidis: NYR89_04200
Help
Entry
NYR89_04200 CDS
T09025
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
aart
Actinobacillus arthritidis
Pathway
aart03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aart00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NYR89_04200 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aart03019
]
NYR89_04200 (rhlB)
Enzymes [BR:
aart01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NYR89_04200 (rhlB)
Messenger RNA biogenesis [BR:
aart03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NYR89_04200 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WGE90049
LinkDB
All DBs
Position
897196..898416
Genome browser
AA seq
406 aa
AA seq
DB search
MSKHLTEQRFIDFPIHENVIAALDSKGFEFCTPIQAKTLPITLAGNDIAGQAQTGTGKTM
AFLVATFHHLLSNDIQTAKHQPRALILAPTRELAVQIGSDAELLVKHSELKLALAYGGDG
YEKQVQAIEQGVDILVGTTGRVIDYVKQGIINLDKIQVVVLDEADRMFDLGFIKDIRYLM
RKCPKPEQRLTMLFSATLSPRVRELAYEDMDNAQYIEIEPLQRTGHRIKEELFYPSNEDK
MALLLTLLEEEWPERCMIFANTKHKCEEIWQYLGADGHRVGLLTGDIAQKKRLALLDSFT
KGSLDILVATDVVARGLHIPEVTHVFNYDLPDDREDYVHRIGRTGRAGESGHSISFACER
YAVNLPAIEEYIGHHIPVSQYDSSALLNLPKPMRSRTKSFSQNKKR
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacatcttaccgaacaacgttttattgattttccaattcacgaaaatgttatt
gcggcattagatagcaaaggatttgagttttgcacaccaatccaggcaaaaacactacca
attacactagctggcaatgatattgccggacaagctcagactggtacgggtaaaacaatg
gcgtttttggttgcaacttttcatcatttactcagcaatgatatacaaaccgcaaaacat
caacctcgtgcattaatactcgccccgacccgtgaattagccgtacaaattggttctgat
gctgaattattagtaaaacattccgagttaaaattagcactagcctatggcggtgacggt
tatgaaaagcaagtacaagctatcgaacaaggcgtagatattttagtcggtacgactggc
cgagtaattgattacgtaaaacaaggcattatcaatttagacaagatacaagttgttgtt
ttagatgaagccgatcgtatgtttgatctcggattcattaaagatattcgttatctcatg
cgtaaatgtccaaaaccggaacaacgtctaacgatgctattttccgcaacactttcccct
cgtgttcgagaattagcttatgaagatatggataatgcacaatatatcgaaatcgagcca
cttcaacgcaccggacatcgtataaaagaagaactgttctatccgtctaatgaagataaa
atggctcttttactgaccttactcgaagaagaatggcctgaacgttgtatgatctttgcg
aatactaagcataaatgtgaagaaatttggcaatatttaggcgctgacggacatcgtgtc
ggattactgaccggcgatatcgcccaaaagaaacgtttagcattattagacagctttact
aaaggtagcctagatattttagtcgcaactgatgttgttgctcgaggtttacatattcct
gaagttactcatgtatttaattatgatttaccagatgatcgcgaagattacgtacaccgt
atcgggcgaacagggcgtgctggagaaagcggtcactcaatcagctttgcctgcgaacgt
tatgcagtgaatttaccggcaattgaagaatatatcggtcatcacattccagttagccaa
tatgatagtagtgcattattaaatctccctaaacctatgcgttcacggactaagtctttt
tcacaaaataagaaacgttaa
DBGET
integrated database retrieval system
