Actinobacillus arthritidis: NYR89_04350
Help
Entry
NYR89_04350 CDS
T09025
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aart
Actinobacillus arthritidis
Pathway
aart03030
DNA replication
aart03410
Base excision repair
aart03420
Nucleotide excision repair
aart03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aart00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NYR89_04350 (polA)
03410 Base excision repair
NYR89_04350 (polA)
03420 Nucleotide excision repair
NYR89_04350 (polA)
03440 Homologous recombination
NYR89_04350 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aart03032
]
NYR89_04350 (polA)
03400 DNA repair and recombination proteins [BR:
aart03400
]
NYR89_04350 (polA)
Enzymes [BR:
aart01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NYR89_04350 (polA)
DNA replication proteins [BR:
aart03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NYR89_04350 (polA)
DNA repair and recombination proteins [BR:
aart03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NYR89_04350 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NYR89_04350 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
WHD_BrxR
VMAP-M8
Motif
Other DBs
NCBI-ProteinID:
WGE90073
LinkDB
All DBs
Position
complement(923481..926354)
Genome browser
AA seq
957 aa
AA seq
DB search
MATIAQNPLVLVDGSSYLYRAFHAFPPLTNKNGEPTGAMYGVLNMLKSLIAQVEPSHIAV
VFDAKGKTFRDELFEQYKSHRPPMPDDLRVQVRPLHTIIKALGIPLISIEGVEADDVIGT
LAVQAANDGKNVLISTGDKDMAQLVNDHIMLINTMNNTLLDREGVIEKYGIPPELIIDYL
ALQGDASDNIPGVKGVGEKTALGLLQGIGSLKEIYANLDQVATLSFRGAKTLAPKLEAEK
EAADLSYLLATIKTDVELEVTHEQLVVQPQKRDELVELFGRYEFKRWLNEVMNDANPVTQ
NPSEKIPNNYQATVSVSQAVETEQTFAKVEIDRSRYETITTMEQLQSWIEKINQAKLVAV
DTETDNLDSMSANLVGISFGLVNGEACYIPLTHKEQVTLEPQQSDLFSEPAEAESTTSFE
LAKNQLNLTACLSELKPLLESTDVKKIGQNIKYDLTIFANHGVEVQGVVFDTMLESYTLN
STGRHNMDELADRYLGHKTIEFEDIAGKGKNQLTFDKIAIDVASKYATEDADVTMKLHQV
LVPELDKTPTLVKLFNDIEMPLVEVLSRIERNGVLIDPEKLLAQSAEIEQRLAELEQLVH
SEAGEVFNLASTKQLQEILFTKLGLPVLKKTPKGAPSTNEEVLEELAGQGHLVPKLLMEH
RGLSKLKSTYTDKLPLMINSKTGRVHTSYHQAVTATGRLSSSDPNLQNIPIRNEEGRRIR
QAFIANKGYKIVATDYSQIELRIMAHLANDDGMITAFAEGKDIHRATAAEIFGLALDQVT
SEQRRSAKAINFGLIYGMSEFGLSNQLGISRADAKKYMERYFQRYPAVQQFMTDIRESAS
EKGYVETLFGRRLYLPEIKSSNAMRRKAAERVAINAPMQGTAADIIKVAMIGIDKAIRGD
DNIKMIMQVHDELVFEVKEELIEHYSQLIKAEMEKAIQLKVPLIAEVGIGDNWDEAH
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggctacaattgctcaaaatccgctcgttcttgtggacggttcttcttatctttatcgt
gcgtttcatgcgtttccgccgctgactaataaaaatggtgagccgacgggggcgatgtat
ggcgtgttaaatatgctgaaaagtttgattgctcaggttgagccgagccatattgcggtg
gtttttgatgcgaagggtaaaactttccgtgatgagttatttgagcaatataaatcgcac
cgtccgccgatgccggatgatttgcgtgtacaagtgcgaccgttacatacgattattaaa
gcgttaggcatcccattaatttcgattgagggggtggaagcggatgacgtgatcggtacg
ctcgcggtgcaggcggcgaatgacggcaaaaatgtgttaatcagtaccggcgataaagat
atggcacaattagtgaacgatcacattatgctgattaacacgatgaacaatactttgctt
gatcgtgaaggtgtgattgagaaatacggtattccgccggagctgatcattgattattta
gcattgcaaggcgacgcttcggataatattcctggtgtgaagggcgtaggtgagaaaacc
gcattaggtttgttgcaaggaatcggttcgttgaaagagatttatgcgaatttggatcaa
gtggctacgctttcattccgtggtgctaaaacgcttgcaccgaaattagaagcagagaaa
gaagcggcggatctatcttatttgcttgccacgattaagactgatgttgaactggaagtt
acccatgagcaattagttgtacaaccgcaaaaacgtgacgaattagttgagctgtttggg
cgttatgaatttaagcgttggttgaatgaagtgatgaatgatgccaatccggttacacaa
aatccatcggaaaaaatacctaataattatcaggcgacagtttcggtatcacaagcggtt
gaaaccgagcaaacttttgcaaaagtggaaattgatcgtagccgatatgaaacgatcaca
acgatggaacagttacagtcttggattgaaaagatcaatcaagcaaaattagtggcggtg
gataccgaaaccgataatttagattctatgtcggcaaatttagtcgggatttcattcggt
ttggttaatggagaagcgtgctatattccgttaactcacaaagaacaggtaacgcttgag
cctcagcaaagtgatctattctctgagccggcagaagcggaatctaccacaagttttgag
cttgcaaaaaatcagctaaatttgaccgcttgtttaagcgaacttaagccgttattagaa
agtaccgatgtgaaaaaaatcgggcaaaatatcaaatatgatttaacgatttttgcaaat
catggtgtggaagtacaaggtgtggtgtttgatacaatgctagaatcttacacgctaaat
agtaccggccgtcataatatggacgaattagcggatcgctatttagggcataagacgatt
gagtttgaagacattgccggtaaaggtaaaaaccagctgacatttgataaaattgcgatt
gatgttgcatctaaatatgcgacggaagatgcggatgtgacgatgaaattacatcaggta
cttgtaccggaattagacaaaacgccgacattggttaagttgtttaatgatattgaaatg
ccgttggttgaagtgctttctcgtattgagcgtaacggtgtattgattgatccggaaaaa
ttactcgcacaatcggcagaaatcgaacagcgtttagctgaattggaacagcttgtgcat
agcgaagctggtgaggtctttaatcttgcttctaccaaacaattacaggaaatattgttt
actaaacttggtttacctgtcttgaaaaaaacaccaaaaggtgcgccttctactaatgaa
gaagtgttagaggaattagcgggacaagggcatttagtaccgaaattactcatggaacat
cgtggtttaagtaagttgaaatcgacttataccgataaattaccattaatgattaactcc
aaaacaggtagagtacacacctcttatcaccaagcggtaacggcgaccggtcgcctttca
tcgagcgatccgaatttacaaaatattccgattcgaaatgaggaaggtagacgtattcgc
caagcgtttattgcgaataaaggctataaaattgtcgcgaccgactattcgcaaatcgaa
ttacgtattatggcgcatttagcaaatgatgatgggatgattactgccttcgccgaaggc
aaagatattcaccgtgcaacggcggcggaaattttcggtttagcgttggatcaagtaaca
agtgagcaacgtcgtagtgctaaagcaattaattttggtctaatttacggtatgtcggaa
tttggtttatcaaatcagttaggtatttcacgtgccgatgcgaaaaaatatatggaacgt
tatttccaacgttatccggcggtgcaacaatttatgaccgatattcgtgaaagtgcgagt
gaaaaaggctatgtggaaacacttttcggtagacgtttatatttacctgagattaaatcc
agtaatgcaatgcgtcgtaaagcggcagaacgtgtggcgatcaatgcaccaatgcaaggc
accgcggcagatattatcaaagtggcgatgattggcattgataaagcgattcgaggtgat
gacaatattaaaatgattatgcaagtgcatgatgaattggtgtttgaagtaaaagaagaa
ttgatcgaacattacagccaattaattaaagcggaaatggaaaaagcgattcagcttaaa
gtgccgttaattgccgaagtcggcattggcgataactgggatgaagcacattaa
DBGET
integrated database retrieval system
