Actinobacillus arthritidis: NYR89_09660
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Entry
NYR89_09660 CDS
T09025
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
aart
Actinobacillus arthritidis
Pathway
aart00300
Lysine biosynthesis
aart00470
D-Amino acid metabolism
aart01100
Metabolic pathways
aart01110
Biosynthesis of secondary metabolites
aart01120
Microbial metabolism in diverse environments
aart01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
aart00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NYR89_09660 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NYR89_09660 (dapF)
Enzymes [BR:
aart01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NYR89_09660 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WGE89237
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All DBs
Position
2020421..2021245
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVIDGVTQNVYLTEDVIRKLADRHTGVGFDQLLLVEPPYDPDLDFHY
RIFNADGSEVAQCGNGARRFARFVTLKGLTNKQDIHVSTAKGKMVLTLKGEEKVRVNMGE
PIWEPAQVPFTANKFEKNYILRTDLQTVLCGVVSMGNPHCVLQVEDIKTAPVNELGPLLE
NHERFPERANIGFMQVVNRNHIKLRVFERGAGETQACGSGACGAVAVGIMQGLLDSNVQV
DLPGGSLQIEWEGVGHPLYMTGDATHIYDGFIKL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttcaaaaatgcacgggcttggcaatgactttatggtgattgatggtgtaacg
caaaatgtctatcttaccgaggatgtgatccgaaaattagctgatcgtcatactggcgtt
ggcttcgaccaattattgcttgtagagccgccatacgacccggatttagatttccattac
cgtatttttaatgcggacggtagtgaagtggcacaatgcggtaatggtgcacgccgcttt
gcccgttttgtcacgctcaaaggtttaaccaataaacaagatattcacgtgagtactgcc
aaaggcaaaatggtattaactttaaaaggtgaagaaaaagttcgtgtgaatatgggtgaa
ccgatttgggaaccggcacaggttccgtttacggcaaataaatttgaaaaaaattatatt
ctaagaacggatttgcaaacggtgttatgcggtgtggtttcaatgggcaatccgcattgt
gtgttacaagttgaagatattaagacagcaccggtaaatgaattaggacctttgttggag
aatcatgaacgctttcctgaacgcgcgaatatcggctttatgcaagtagtgaatcgtaat
catattaaattacgagtatttgaacgtggtgccggcgaaacgcaggcttgcggtagcggt
gcttgcggtgcggttgcagtagggattatgcagggcttgttggatagtaatgtacaagtc
gacttacccggtggctcactccaaatcgagtgggaaggtgttggacatccgttatatatg
accggtgacgcaacccatatttatgacggttttattaaactttaa
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