Candidatus Amoebophilus asiaticus: Aasi_0038
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Entry
Aasi_0038 CDS
T00730
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aas
Candidatus Amoebophilus asiaticus
Pathway
aas03420
Nucleotide excision repair
aas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Aasi_0038
03430 Mismatch repair
Aasi_0038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aas03400
]
Aasi_0038
Enzymes [BR:
aas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Aasi_0038
DNA repair and recombination proteins [BR:
aas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Aasi_0038
MMR (mismatch excision repair)
Other MMR factors
Aasi_0038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
AAA_12
ResIII
DEAD
IREH1
DUF8079
Motif
Other DBs
NCBI-ProteinID:
ACE05493
UniProt:
B3EU74
LinkDB
All DBs
Position
complement(49679..51952)
Genome browser
AA seq
757 aa
AA seq
DB search
MIVPLDMLNEQQRQAAVNTEGPCMIIAGAGAGKTKVLTTRIAYLIQEKKVDPFKILALTF
TNKAANEMKKRIEQVIGPAAKNVWLGTFHSCFAKLLRIEADKIGYPSSFSIYDTTDSKSL
LKSIIKEMNLDDKTYTPNTVLSRISSAKNRLITAQEYINNPIYQQDDEEAMKPKVGEIYV
QYAKRCLQAGAMDFDDILLNTYLLLNQHLDILYKYQERFQYILIDEFQDTNLAQYAIVKD
LAGIHKNICVVGDDAQSIYAFRGANIRNILNFEKDYPNLTIIKLEQNYRSTQNIVEAANG
IIRNNQLQLKKNVWTANEKGEVIGLIRATTDAEEGRLVAASIFEIKMQNQLRNEDFAILY
RTNSQSRAIEEALRKINLPYRMLGGTSFYQRKEVKDLLAYLRFIVNHNDEEALKRIINEP
KRGIGPSNIEKMVVAASDHGIPLWEVMCNAKNFLSGRVAEAVEEFAHMIQAMALDLTKKD
AYEIASEIAKRSGLLKSLYEDKTVEGLARYENVQELLSGIKAFTANPEQVDTSLATFLQD
VALATNNENEEDGEDKISLMTIHAAKGLEFKYVYIVGIEEDLFPSSMMLGSREDLEEERR
LFYVALTRAQKKVFLSYTISRYRFGKLKQCEVSRFIGEIDPVYLHMAHVTNSYTEKSNTN
YTKQFISSMRITPQQKSVKVKFQAYAQSSKPAFQPSDTSQLKSGMQVEHPTFGIGMVISV
ELTGTHKKARIAFSESGEKTLLLSFAKLKILNNSVEG
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgatagttcctctagacatgcttaatgagcagcagcggcaagcagccgttaacacagaa
gggccgtgtatgattattgctggagcaggtgcaggtaaaacaaaagtacttaccactcgc
atcgcttatctgatccaggaaaaaaaagtagatccctttaagatattggcattgaccttt
actaataaggcagctaatgaaatgaaaaagcgtattgagcaagtaatagggcctgcagcc
aaaaacgtctggctaggtacttttcatagttgttttgcaaaactcttgcgtattgaagca
gataaaataggataccctagcagctttagtatatatgacactacagatagtaaatcgctg
cttaaatccattattaaagagatgaatttagatgataagacttatacacccaatacagtc
ttatctcgcatatcctctgctaaaaataggttaattacagcacaagagtatatcaacaac
cctatataccagcaagatgacgaagaggctatgaagcccaaagtaggagaaatctatgta
cagtacgcaaaacgttgcttgcaagctggtgctatggatttcgatgatatccttttaaat
acctatttactacttaaccagcacttagacatactttataagtatcaggaaaggtttcaa
tatattcttattgatgagtttcaagatactaacttagctcagtatgctattgtaaaagac
ctagcaggtatacataaaaatatatgtgtggtgggggatgatgcacagagtatttatgca
tttagaggtgccaacatacgtaatatcttaaattttgaaaaagattatcctaacctcact
attatcaagctagaacaaaattaccgttctacacaaaatatagtagaagctgctaatgga
attattagaaataatcaattacaactaaaaaaaaatgtttggacggctaatgagaagggg
gaagttattggtttgattcgtgcaactaccgatgcagaagagggtagattagtagctgct
tctatatttgaaataaaaatgcaaaatcaactaagaaatgaagattttgctattctatat
agaaccaacagccagtctagagctattgaagaggcacttcgaaaaataaatctaccttat
cgtatgttgggcggtacctctttctatcaacggaaagaagtaaaagatttgttggcttat
ttacgctttatagtcaatcataatgatgaagaggcgcttaaacgtattatcaatgagcct
aaacgaggtataggccctagtaatattgagaagatggttgtagcagcgagcgatcatggc
atacctttatgggaggtaatgtgcaatgctaagaattttttaagtggccgagtggctgaa
gctgtagaggagtttgcccatatgattcaagctatggcactagatcttactaaaaaagat
gcatatgagatagccagcgagattgctaaaagatcagggttacttaaatcgctttatgag
gataagactgtagagggactggctcgctatgaaaacgtacaagagctcttgagtggaata
aaagctttcactgctaaccctgagcaagtagatactagcttggctacctttttgcaagat
gtagcattagctaccaataatgaaaatgaagaagatggagaggataaaatatctttaatg
actatacatgcagctaaaggtttagagtttaaatatgtgtacattgttggtattgaagaa
gatcttttcccttcttcaatgatgctaggaagtagagaagatttagaggaagaaagacga
ttattttatgtggctcttactcgcgcgcaaaagaaagttttcttatcttatactataagt
aggtatcgttttggcaaattaaagcagtgcgaagtaagcagatttattggagaaatagac
ccagtctatttacacatggctcatgttactaacagctatactgagaagtcaaataccaac
tataccaagcaatttattagtagcatgcgaattacacctcagcaaaaaagtgtcaaagtt
aaatttcaagcatatgcgcagagcagcaagccagctttccagcctagcgacacgtctcaa
cttaaatcaggcatgcaagtagaacatcctacatttggtataggtatggtaatctccgta
gaactaacaggaactcataaaaaggccagaattgctttttcagaatcaggtgagaagact
ctgctacttagttttgctaagctaaagattttgaataattctgtagaaggataa
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