Candidatus Amoebophilus asiaticus: Aasi_1422
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Entry
Aasi_1422 CDS
T00730
Name
(GenBank) hypothetical protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
aas
Candidatus Amoebophilus asiaticus
Pathway
aas03410
Base excision repair
aas03430
Mismatch repair
aas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Aasi_1422
03430 Mismatch repair
Aasi_1422
03440 Homologous recombination
Aasi_1422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aas03400
]
Aasi_1422
DNA repair and recombination proteins [BR:
aas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Aasi_1422
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Aasi_1422
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Aasi_1422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ACE06714
UniProt:
B3EU12
LinkDB
All DBs
Position
complement(1825284..1826984)
Genome browser
AA seq
566 aa
AA seq
DB search
MDKRWVFQTMPEPTVVASLANAIGVDSSIAALLVQKGVTDFNQAKDYFRPSLADLHDPFI
MKDMDKAVGRLLRAIENQEEILIYGDYDVDGVTSVSLVYGFLKQYHSKLQFYIPDRYKEG
YGVSKQAINWAIETGISLIITLDCGIKATECIQQAQIAGIDVIVCDHHEPGEGLPPAYAI
LDPKQKTCPYPFKELSGCGVGFKLLQAFVLKQNISLDILYRYLDLVAISIACDLVPLTDE
NRILAYHGLKRLNNSPSFGIQAIIQVANLPWTLGISQLVFGLGPRLNAAGRVDHGSLAVN
LLLAEDSVTASSLARQIEDKNGFRRYLDSTITAEALQLMKASDASLIAKTTVLFKEDWHK
GVIGIVASRCIEHYYRPTIILTASGNKATGSARSVAGYNIYEAITECAELLEQYGGHAHA
AGLTLPLENIISFQERFEQVVSSTISQELLIPVQKIDLLLPLEKVTNKFYNILNQMAPFG
NGNMRPVFATELVIATKYRILKENHLKLTVQEPASGICIDAIGFGLAKYAHLVCDRKPFK
IAYTIERNNYQGQVNLQLNIKGLQPI
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaagatgggtgtttcaaactatgccagagcctactgtggttgcatcattagcc
aatgctattggcgtagatagctctattgctgctttattggtacaaaagggagtaactgat
tttaatcaggcaaaagattattttagaccttcgttagccgatctgcacgatccgtttatt
atgaaggatatggataaggcagtaggccgtttactgcgagctattgagaaccaagaagaa
atattaatctatggcgactatgatgtggatggagttacatcagtatcgttggtatatggc
tttttgaagcaatatcatagtaagctacaattctatattccagatagatataaagaaggt
tatggggtttctaagcaagctatcaactgggctattgagacaggtatttccctaattata
acattagactgtggtataaaagccacagaatgtattcaacaagcccagatagcaggaatt
gatgtaattgtatgtgatcaccatgaaccaggtgaaggcctgccacctgcctatgcaatt
ttagatcctaaacaaaaaacatgtccttatccttttaaagagctttctggttgtggggtt
ggttttaagttacttcaagcttttgtattaaagcaaaacatttcattagacatcctctat
cgatacctggacttagtagctattagcattgcctgcgacttagttccactcacggacgaa
aatagaatacttgcttaccatggactaaagcgcttaaataatagtccttcatttggcata
caagctattatacaagttgctaatttaccctggacattaggaatttcacaattggttttt
ggtttagggcctcgccttaatgcagcaggcagggtggaccatggtagcttagctgtaaat
ttacttttggcagaagattcagtgactgctagctcgctagcacgtcagattgaagacaaa
aatggttttagaagatacttagacagtactattacagcagaagcacttcagttgatgaaa
gctagcgatgcaagtttaatagctaaaactacggtgctttttaaagaagactggcacaag
ggagtaattggtattgttgcttctagatgtatagaacattattaccgtcctaccatcatt
cttacagcttctggtaataaggctacaggttctgcacgttctgtggcaggctataatata
tatgaggccattaccgaatgtgctgagctattggaacaatatggagggcatgcccatgca
gcaggccttacattacctttagaaaatattatatcttttcaagaacgttttgagcaagtt
gtctctagcactatttcgcaagaattgcttattcctgttcaaaaaatagatttgttgctg
ccgcttgaaaaggttaccaataagttttataatattcttaaccagatggctccttttggt
aatggtaatatgaggcctgtatttgcaacagagttagtgatagctactaaatatagaatt
cttaaagaaaatcatttaaaactaacggtacaagaacctgcttcaggcatctgtatagac
gctattggttttggattagcaaaatatgcccatttggtgtgtgaccgtaagccatttaag
atagcttataccatagagagaaataattaccaagggcaagtaaatttacaacttaatatt
aaaggtttacagccaatatag
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integrated database retrieval system
