Acetobacter ascendens: A4S02_02910
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Entry
A4S02_02910 CDS
T05523
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
aasc
Acetobacter ascendens
Brite
KEGG Orthology (KO) [BR:
aasc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A4S02_02910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aasc03021
]
A4S02_02910
Transcription machinery [BR:
aasc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A4S02_02910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AOW45895
UniProt:
A0A1D8QU77
LinkDB
All DBs
Position
596223..598208
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AA seq
661 aa
AA seq
DB search
MATKTASTNAAQEQDGDTTLLDTRSSAVKKLIAKGRERGCITFDELNAVLPQDKMSSEQI
EDIMAVLSEMGIQVVENEDNDNEEAEPKKAAAESEDAEEEAEAEAEAESPTGNVNAESVG
RTDDPVRMYLREMGTVELLSREGEIAIAKRIEAGRDEMIGGLCESPLTFRAIISWHEMIR
NNEMLLRDIVDLEAMQSGGNPLEEGGDGTFNEAESDSESEEAEEPETEGEGDIESEGSGL
SLSALEEKLKPEILALFDEIEPLYAALRKLQVQRIEALTSGEDVDGNFEENYVALREKLV
GKVEQVHLHNNRIEDLVAQLKQMFQKLNMLEGRMLRLAESCRVSREDFLLKYRGRELDPG
WMDMVSGLSGRSWKNFVAKHANTVVGLRDQVAQLAQETGLPIGEFRRVYATVARGERDSA
RAKKEMIEANLRLVISIAKKYINRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATW
WIRQAITRSIADQARTIRIPVHMIETINKLVRTSRQMLHEIGREPAPEELAEKLGMPLEK
VRKVLKIAKEPISLETPIGDEEDSHLGDFIEDKTAIIPLDAAIQTNLREATTRVLASLTP
REERVLRMRFGIGMNTDHTLEEVGQQFNVTRERIRQIEAKALRKLKHPSRSRKLRSFLDD
N
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaaaaacggcatcaaccaacgcagcgcaggaacaggatggtgataccaccctg
cttgatacgcggtcttctgcagtcaaaaaactgattgccaaagggcgtgagcgcgggtgc
attacgtttgatgagctcaatgccgttctcccgcaggacaaaatgtcttctgaacagatt
gaagacattatggccgtgctgtctgaaatgggtattcaggttgtcgaaaacgaagataac
gacaacgaagaggctgaacccaagaaagccgcagcagaaagcgaagatgcagaggaagaa
gctgaggccgaagccgaagctgaaagcccaaccggtaacgtaaatgccgaaagcgtaggc
cgtacggatgaccccgtgcgtatgtatctgcgcgaaatgggcacggtggaactgctctct
cgtgagggcgaaattgccattgccaagcggattgaggctggtcgcgatgaaatgattggc
ggcttgtgtgaaagcccgctgacatttcgtgccatcatctcctggcatgagatgatccgt
aacaatgaaatgctgctgcgtgacattgtggatctggaagccatgcaaagtggtggcaac
ccgctggaagaaggcggagacggcacgtttaacgaagccgaatccgattccgaatcggaa
gaagcagaagagccagaaaccgagggcgaaggcgatattgagagcgaaggcagtggcctt
tccctttctgcgctggaagaaaagctcaagccggaaattctcgcgctttttgatgagatc
gaaccgctttatgcagccctgcgtaagctacaggttcagcggattgaagccctgacatct
ggtgaagatgttgatggcaattttgaagaaaactacgttgccctgcgtgaaaaactggtg
ggcaaggtagagcaggtgcacctgcacaataaccggattgaagatctggttgcccagctt
aagcagatgttccagaagctgaacatgctggaagggcgtatgctgcgtctggcagaaagc
tgccgtgtctcgcgtgaagatttcttgctgaaataccgtggccgtgagcttgatccgggc
tggatggacatggtttccggcctgtctggtcgttcatggaagaactttgtagccaagcac
gccaatacggtggttgggctgcgtgatcaggttgcgcaactggcgcaggaaacgggtttg
ccgattggcgaattccgccgtgtgtatgcaacggttgcgcgtggtgagcgagattctgcc
cgtgctaaaaaggaaatgattgaagccaacctgcgcttggttatttccattgccaaaaaa
tacatcaaccgcggtcttcagttccttgatctgattcaggaaggcaatatcggcctgatg
aaggcggtggataagtttgaataccgccgtggctacaagttctccacctatgcaacgtgg
tggatcaggcaggctattacgcgctccattgcggatcaggctcgtacaatccgtattcca
gtgcatatgatcgaaacgatcaacaagctggtgcgtacctctcgccagatgctgcatgaa
atcgggcgtgaacctgcgccggaagaactggctgaaaagctggggatgccgctggaaaaa
gtgcgcaaggtgctgaaaattgccaaggagccaatctctctcgaaaccccgatcggggat
gaggaagatagccatctgggtgatttcattgaggataaaacagctattatcccgttggat
gctgctatccagaccaacctgcgtgaagccacaacccgcgttctggcctctcttaccccg
cgtgaagaacgcgtgctgcgtatgcgctttggtattggtatgaacacggatcatacgctg
gaagaagttggccagcagtttaacgtaacgcgtgaacgtatccgtcagattgaagccaag
gccctgcgtaaactcaaacatccaagccgtagccgtaagctgcgttccttcttggatgat
aactga
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