Acinetobacter sp. AS23: K6I41_10830
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Entry
K6I41_10830 CDS
T11553
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aasz Acinetobacter sp. AS23
Pathway
aasz03030
DNA replication
aasz03430
Mismatch repair
aasz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aasz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K6I41_10830 (dnaE)
03430 Mismatch repair
K6I41_10830 (dnaE)
03440 Homologous recombination
K6I41_10830 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aasz03032
]
K6I41_10830 (dnaE)
03400 DNA repair and recombination proteins [BR:
aasz03400
]
K6I41_10830 (dnaE)
Enzymes [BR:
aasz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K6I41_10830 (dnaE)
DNA replication proteins [BR:
aasz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K6I41_10830 (dnaE)
DNA repair and recombination proteins [BR:
aasz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K6I41_10830 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
URM39469
LinkDB
All DBs
Position
2329983..2333546
Genome browser
AA seq
1187 aa
AA seq
DB search
MQFVHLGIYTEFSITESIVRIPDLVNAAVKDQMPALALTDLSNLHAAVKFYNSCLKKGIK
PLLGSTIRLDDAQHRATLLAMSDVGWKSLTEIVSRGFIEGQQLSIPCVKKEWVLEQHQDI
IVLLGQHSDVGQMLCSSNPQKAAPLLEAWLEKFGNRVYLALTRTDRPGEEDFIQEAAKLA
AQYNVGVAAHNDVHFVEKEDFEAHEARVCIADGYVLADNRRPRIYSPEQHFKTSDEMIEL
FSDIPSAIENTYHIAKRCNVKLQLGTYFLPDYPIPDGFTIDTYFEHLSKVGLEERLNYLY
PVEKRGEDWTEIRKPYDERIDYEVGIILKMGFPGYFLIVMDFIQWAKNNGVPVGPGRGSG
AGSLVAYSLKITDLDPLRYDLLFERFLNPERVSMPDFDVDFCIAGRDRVIDYVSRTYGRE
AVSQIATFGTMAAKGAIRDVARVLGKSYGLADRISKMVPTKPLGVDLATAIDMEPQLKDI
VTNPSNPDNDDASEIWEMALKLEGVTRNTGKHAGGVVIAPGKITDFSAVLCDADGTNRVA
QYDKDDVEAAGLVKFDFLGLRNLTVIEDAIQNINKNRDSNDQLNILHVPLDDAKAYSVFA
DANTTAVFQFESVGMKRMLKEARPSKFEEIIAFVSLYRPGPMDLIPDFIHRMHGGDFEYL
HPLLEGVLEPTYGIMVYQEQVMQTAQICAGYTLGGADLLRRAMGKKKPEEMVKQRQIFLE
GAAEKGIDESTANHIFDYMEKFAGYGFNKSHAAAYALVAYHTAWLKAHYPAEFMAAVMTS
EMQNTDSVVFLIDDCRNNNLEVLPPSVNMSTYHFHASNDKTIVYGLGAIKGVGEQAMQSV
IDSRRQFGPYTDLFDFCHRIDLKKINKRTLEALIRAGALDCLGIERASLMAQLPEAVQAA
EQARSNRESGIMDLFGEVEEVQRKPAKPVKPWSDEVRLKGEKDTLGLYLTGHPIDVYRQE
LKAFIPVKLNEITATRRGVTTVYAGLVIDVANFPNRVVIVLDDGTARIEVSCNHERFQRF
KDIVQVERVVVFEGEIYEREGFDRPMGRLTKAFTLNEIRQKRANSIQIKLTEEFMQPTLA
KDLQNMILPFCNVDMHQHITLQLQIDQPYAQAELQFGPQWKVAPLDELLAKLRDYFGKDN
IYIEYQVKSKAAKAADPVRPHAVAPPPAGMSMDDALDLYQSEVSQYS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttgttcatctaggtatttatacagaattttcgattacagagtcgatagttcgc
atacctgacttggtcaatgctgcggttaaagaccaaatgcctgcgttggcattaactgac
ctctctaacctccatgcggcggtaaagttttataattcttgtttaaaaaaaggcattaag
cctcttttaggcagtacgattcgccttgatgatgctcaacaccgtgcaactttacttgca
atgagtgatgttgggtggaaaagtcttaccgaaatcgtttcacgcggttttattgaagga
caacagctcagtattccatgtgtcaaaaaagaatgggtacttgaacagcatcaagatatt
atcgttttacttggccagcatagtgatgttggtcagatgctttgttcatctaacccgcaa
aaagcagctccccttttagaagcatggctcgaaaagtttggtaaccgtgtttatcttgct
ttaacacgtaccgaccgtcctggtgaagaagactttattcaagaagcagctaaacttgct
gcacaatataatgttggtgtagctgcacataatgatgtgcactttgtagaaaaggaagat
ttcgaagcgcacgaagcgcgtgtttgtatcgctgatggttatgtactagcagataatcgc
cgtccacgtatatatagtcctgagcagcactttaaaacctcagatgaaatgatcgaattg
ttttccgatattcctagtgctatcgagaacacctatcatattgctaaacgctgtaacgtt
aaactgcaactcggcacttactttttacctgactatccaattccagatggttttaccatc
gacacttattttgaacatttatctaaagtaggtttagaagaacgcttaaattatctttac
cctgttgaaaaacgtggtgaagattggacagagattcgtaagccttacgatgaacgaatt
gattatgaagtcggtattatcctgaagatgggtttccctggctacttcctcatcgtcatg
gacttcattcaatgggcaaaaaataatggtgttcctgttgggccaggtcgtggttcaggt
gcaggttcattagtcgcatatagcttaaaaattacagaccttgacccacttcgttacgat
ctacttttcgaacgtttcttgaacccagaacgtgtatcgatgcctgactttgacgtcgat
ttctgtattgctggacgtgaccgcgttattgattacgtatcgcgtacttatggtcgtgaa
gccgtttcacaaattgcaactttcggaaccatggcagcaaaaggtgcaatccgtgacgtt
gcacgtgtattgggtaaatcttacggtttagctgaccgtatttcaaaaatggtacctacc
aaaccgctcggtgtggatttagctaccgctattgatatggaaccccagcttaaagatatt
gtgaccaacccatctaacccagataacgacgatgcaagcgaaatctgggaaatggcatta
aaattagaaggtgtaacccgaaatactggtaaacatgccggaggtgtagtcattgcacca
ggtaaaattaccgatttctcggctgtactttgtgatgcagatggaacaaaccgcgttgct
caatatgataaagacgatgtagaagcagcgggtctagtcaagttcgacttcttgggttta
cgtaacttaaccgttattgaagacgcgattcagaatattaataaaaaccgcgacagtaat
gatcaactcaatatcttgcatgttcctctagacgacgctaaagcttattccgtctttgcc
gatgcaaatacgacagcggtattccagtttgaatccgtcggcatgaaacggatgcttaaa
gaagcacgtccaagcaaatttgaagaaattattgcgttcgtatccttgtatcgtccgggt
ccaatggacctgattcctgactttattcaccgtatgcatggtggagattttgaatatctc
catcctcttttagaaggtgtattagaaccaacttacgggattatggtttatcaggaacag
gtgatgcagactgcacagatctgtgcaggttatacattaggtggcgcagacttactacgc
cgtgcaatgggtaaaaagaaacctgaggaaatggtcaaacagcgccaaatcttcttagaa
ggtgctgctgaaaaagggattgacgaaagcacagcaaaccatatctttgactatatggaa
aagtttgcaggctatggtttcaacaaatctcacgcggctgcttatgccctagttgcctac
catactgcatggttaaaagcccattatcctgctgagtttatggcagccgtaatgacatcg
gaaatgcaaaacacggacagtgttgtatttttgattgatgactgtcgaaacaataatctt
gaagtcttaccaccatcagtcaacatgtcgacttatcatttccatgcaagtaacgataaa
acgattgtttatggtttaggtgcaattaagggtgtcggcgaacaagcaatgcagtcagtt
attgactctcgtcgacaatttggtccttatacagatctattcgatttttgccatcgcatt
gatttgaagaaaatcaataagcgtactcttgaagctttaattcgcgcgggtgcactcgat
tgcttaggaattgaacgtgcaagcttaatggcacaattgcctgaagctgttcaagccgct
gaacaagctcgcagtaaccgtgaaagcggaattatggatttatttggtgaggttgaagaa
gttcaacgcaagccagctaaaccagtaaaaccatggagtgacgaagttcgtctcaaaggc
gaaaaagacacgcttggtttatatttaaccggtcatccaattgatgtttaccgacaggaa
ctcaaagcttttattcctgtaaaactaaatgaaattactgcgacgcgtcgtggtgttacg
acagtttatgcaggtttggtcattgatgtcgcaaacttcccgaaccgtgtggttattgta
ctggatgatggtacggcacgtattgaagtcagctgtaaccatgagcgcttccaacgtttt
aaagatattgtgcaagttgaacgtgttgtagttttcgaaggcgaaatctatgagcgagaa
ggctttgatcgtccaatgggacgtttaaccaaggctttcacgttaaatgaaataagacaa
aaacgtgctaacagtattcaaatcaaattaacagaagagttcatgcagccaacactggca
aaagatctgcaaaacatgatcttgccattttgcaatgtagatatgcatcaacatatcact
ctacagttacagattgatcaaccctatgctcaagccgaacttcagtttggaccgcaatgg
aaagtcgctcctctagatgaattacttgctaaactcagagattattttggtaaagataat
atttatattgaatatcaagtaaagtcgaaagcagctaaagcagcagaccctgttcgtcca
catgctgttgcccctcctcctgcgggtatgtctatggatgatgcattggatttataccaa
agcgaagtttctcaatattcgtaa
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integrated database retrieval system
