Acinetobacter sp. AS23: K6I41_16065
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Entry
K6I41_16065 CDS
T11553
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
aasz Acinetobacter sp. AS23
Pathway
aasz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aasz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6I41_16065 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aasz03019
]
K6I41_16065 (pcnB)
Enzymes [BR:
aasz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
K6I41_16065 (pcnB)
Messenger RNA biogenesis [BR:
aasz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
K6I41_16065 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
DUF4936
Motif
Other DBs
NCBI-ProteinID:
URM40447
LinkDB
All DBs
Position
complement(3414475..3415938)
Genome browser
AA seq
487 aa
AA seq
DB search
MQTLRASKCGLSTAQLPSSILDVIDSLTKAGYEAYIVGGGVRDLMLGFNPKDFDAVTNAT
PSQIKEVFGRRCRIIGRRFELAHVYSGRELIEVATFRAPPKKAVTSASGMILRDNNWGTI
EQDFARRDFSINTLYYQPRKSIVLDFCKAIDDVKNKTLRLLGDPAQRFEEDPVRMLRTLR
FAAKLNFKIDSNILDIFDAEMTQLLRDVSPHRLYDESQKLFTMGHLARVLPMLIEFGVWK
QLFADIQPNLTPFILRAAKNTDQRIQVGKTINPAFFYAVLLWQPFLERCEFYLSKGIVPA
EARAQAGLDVLKRQATRTVIPRFAETFIREVWEMQTRLLNPKPQQIEALAGHARFRAGFD
FLLLREKSGDDTTQGMGSWWEAYQEMSNDEKEAAISQYNRQKARNRRKAAADPIENNKVD
TEIEPLVDIPEPRTRRGKKERTRQDQAVGRFVEKAITSEAGVMGDHPILKRKRVQRDLSQ
VVFGPTQ
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaccttgcgagcgtcaaaatgtggtttgtccacagcccaacttccttcttcgatt
ttagatgtgatcgatagcctgactaaagctggctatgaagcttatattgttgggggtggt
gtccgtgatttaatgctagggtttaatcctaaagatttcgatgcagtgaccaatgcgaca
ccttctcaaattaaagaagtttttggcagacgttgccgaatcattggtcgtcgatttgaa
ttggcacatgtctattcagggcgtgagcttattgaagttgctacattccgtgcccctcct
aaaaaagcagtcactagtgcctcaggcatgattttacgtgacaataattgggggactatc
gaacaagactttgctcgacgtgacttttcaatcaatacgctatattaccaaccgcgtaag
agtattgtgctcgatttctgcaaagcaattgacgatgtaaaaaataaaactctacgttta
ttgggcgatcctgcacagcgcttcgaagaagacccagtgcgtatgctgcgaactctacgt
tttgcagccaagttaaatttcaaaattgattcaaatattctcgatatctttgatgctgaa
atgacgcaattgctgcgtgatgtctctccgcatcgtttatacgatgaatctcagaagctg
ttcacaatggggcatttggcgcgtgttttgccaatgttgattgagtttggtgtctggaag
caactctttgcagatattcagcctaacctcactccatttattttaagagcagcaaaaaat
acagatcaacgtattcaggttgggaaaacaattaacccagcatttttctatgcagtgtta
ttgtggcaaccatttttagagcgttgtgagttttatttatctaaaggtattgtgccggct
gaagcccgtgcgcaggctggtttagatgtcttaaaacgtcaagcaacacgcacagttatt
cctcgctttgcagaaacttttattcgtgaagtttgggaaatgcagacccgtttgctcaat
ccaaaaccacagcaaatagaagcattggctggacatgctcgtttccgtgcaggttttgac
ttcttattacttcgtgaaaagtcaggtgatgacacaacacaaggaatgggaagctggtgg
gaagcctaccaagaaatgtcaaatgacgaaaaagaagctgcgattagccaatataatcgt
cagaaagctagaaaccgtcgtaaagctgctgctgatcctattgaaaataataaagttgac
accgaaattgaacctttggttgatattccggaaccacgcactcgccgtgggaaaaaagaa
cgtactagacaagatcaggcagttggccgatttgttgaaaaagcgattacttctgaagca
ggcgtgatgggtgatcatccaattttaaaacgtaagcgggtacaacgtgatttaagccaa
gtcgtctttgggccaacgcaatga
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