Acinetobacter sp. AS23: K6I41_17170
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Entry
K6I41_17170 CDS
T11553
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
aasz Acinetobacter sp. AS23
Pathway
aasz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aasz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K6I41_17170 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aasz03400
]
K6I41_17170 (recD)
Enzymes [BR:
aasz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K6I41_17170 (recD)
DNA repair and recombination proteins [BR:
aasz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K6I41_17170 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
SH3_13
UvrD-helicase
AAA_11
Viral_helicase1
NAT10_TcmA_helicase
ResIII
SLFN-g3_helicase
AAA_22
Herpes_Helicase
PhoH
DEAD
nSTAND3
T2SSE
ABC_tran
PIF1
AAA
NPHP3_N
AAA_28
Flavi_DEAD
AAA_16
DUF3136
Motif
Other DBs
NCBI-ProteinID:
URM40655
LinkDB
All DBs
Position
complement(3647784..3649535)
Genome browser
AA seq
583 aa
AA seq
DB search
MDNLNSSEQADLSWVTTWSNFLNQAPFTEQSQVSEATSYLQQLIEASLQGDSCIDVSSEQ
IAALGQLAISADQAASNVAPCVYDEQGLALYRYWHLEQRLAEQICRLKQQLIQPVSCDDH
LDLLTDPHQQAALQMVARQSLSIITGGPGTGKTYTLARIIAVLSQAIPHIRVAMAAPTGK
AAQRMQEALQNSFNDPKLLESGLISEELRNQETQTIHRLLGMGHSQTPRFNQKQPLPYDV
IVVDEASMLDLNLATLLFEAVPESCRIILLGDANQLASVDVGAVLADLQQIQALADNRIQ
LQTSRRFAEGALIGQVARFIQMQTSQINHEQVLQQFEIDIVQVSELRSIPLEVDMPDVVQ
LEYLPEGNHAEVEIYYQKLMLGFQGYVKSLKNYLKEERSIEQVQNIVKAFDDYRILTAVR
HGPFGLQQLNQYAQRWIQQQLSIVTVGGWYVGRPVMMTYNDYQLGISNGDIGLCFEHRTQ
PQQFEVYFPSLNKWVAANRLPKSIQSAFALTIHKSQGSEFTHTAVVLDQAAKNLLSQELI
YTAITRAKKVVSLLVHPEALLQSFTVRTTRKSGLVQKVNRLVR
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
gtggacaatctaaatagctctgaacaggccgatttaagctgggtaacaacgtggagtaac
ttcttaaatcaggctccatttactgagcaatcgcaagtgtcagaagccacttcttacttg
cagcagcttattgaagcgagcttacaaggtgatagctgtatcgatgtcagttctgagcaa
attgcagcacttggtcagcttgctatatctgccgatcaagccgcctcaaatgttgcccca
tgcgtctacgatgagcaggggttggcattataccgatattggcatctagagcaacgactt
gcagaacaaatttgtcgattaaagcaacaattaattcaacctgtatcttgtgatgaccac
ttagacctactcacagacccgcatcaacaggcagctttacaaatggttgctcggcagagc
ctgagtatcattacgggtgggccgggtacgggtaagacctatacgcttgcacgtattatt
gcagtgcttagccaagcaattccacatattcgtgtagcgatggctgctccgacgggtaaa
gctgcacagcgcatgcaagaagccttacagaactcgtttaatgaccctaaattgcttgag
tctggattaattagtgaagaactaaggaatcaggaaacgcaaacaattcaccgattattg
gggatgggacatagtcaaacaccacggtttaatcaaaaacaaccacttccttatgacgtg
attgtcgtggatgaggcttccatgctggatttaaatctagctactcttctatttgaggcg
gtgccagagtcttgtcgaattattttattaggagatgcaaatcagctcgcttccgtcgat
gtgggagcggtacttgctgacttgcaacaaatacaggcactcgccgacaacaggatacaa
ttacaaaccagtcgccgttttgctgaaggggcgttgattgggcaggtggcacgttttatt
caaatgcaaaccagtcagatcaatcatgagcaggttttgcaacagtttgaaatcgacatt
gttcaggtttcggagttacgttcaattcctttagaagttgatatgccagatgtggttcaa
cttgagtatttgccggaagggaatcacgcagaagttgaaatttactatcagaagctcatg
ctcggtttccaaggatatgtaaaaagcctaaaaaattatttaaaagaagaacgctcgatt
gaacaagtccaaaacatagtaaaagcatttgatgactaccgcattttaacggctgttcgt
catggtccatttggattacagcagttaaatcaatatgcgcagcgttggatacagcaacaa
ctttcaatagtgacagtagggggatggtatgtgggtcgcccggtaatgatgacttataac
gactatcagctcggtatttcaaatggtgacattggtctgtgttttgaacacagaactcaa
cctcagcagtttgaagtatattttccaagtttgaataaatgggtcgctgcaaatcgatta
cctaaaagtattcaaagtgctttcgctttaacgattcataaatcgcaagggtctgaattt
acacacactgctgtcgttttagatcaagccgcaaagaatttattaagccaagagcttatt
tacactgcgattacacgcgctaaaaaagtagtaagtcttttggttcatcccgaagcttta
ctacagtcctttacagttcgtacgacacgaaaaagtggtttagttcagaaagttaatcgg
ttagttcgttaa
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