Aggregatibacter actinomycetemcomitans D11S-1: D11S_0167
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Entry
D11S_0167 CDS
T00993
Name
(GenBank) biofilm synthesis protein PgaB
KO
K11931
poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]
Organism
aat
Aggregatibacter actinomycetemcomitans D11S-1
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Gene cluster
GFIT
Motif
Pfam:
GHL13
Polysacc_deac_1
Motif
Other DBs
NCBI-ProteinID:
ACX81586
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Position
153254..155170
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AA seq
638 aa
AA seq
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MKILQKLLQIIVVSFVFITGVASAQDRYGVLAYHSVVDDTAAKEEKQYFPQTISANLLIS
HFNWLKDNGYNVVSWQQIIDAENGKSTLPEKAVVLSFDDGYATMYNVIYPILKAYNYPAV
FAPVSSWLDTPVNQLIPYANIKLPRNVFVTWEQVREMEQSGLVEIASHTDNLHHGVRANP
AGSQLPAVVAPEYKNNRYESKTEYKNRLVQDFSRSSKSIQRQIGKKPRIMVWPYGQFNDV
AIDAAKQSGMTHHFALGQKIINKIGDRYVGRLLIDTETGFSTIKNFLDGVDDESKLMRIV
HIDLDSLYDADKKQQAKNFDKLIERMYRYGITTVYLKAFSDPDGDGVADALYFPNRYLPV
RDDIFSQIAWQLRTRANVKVYAWMPVLAFDLRNHVKEATYVVDHRTNQPAKDKYLRLSPY
DRKNVEMIKSIYNDLSFYAKFDGILFHDDAFLTDFEGVESHSEGDGVTAAAKQKTLDLIG
VTDELTNALKPYFLSSTPALKTVRSLHASVITNPKAEEWFAQNLTTLTKHYDTTAIMAMP
YMEHHQTISAKQAEKWFAALIQRVKAQAPLNKVLFEFQSVNLKTKQPIPETELISWIELL
QRNGIYSYGYYPDNFVADQPNMQKMRRYMSLNTQAGKP
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttacaaaaattattacaaattattgtcgtttcatttgtgtttatcaccggt
gtagcatctgctcaggatagatacggcgtgctggcgtatcactcagtagtggatgatacg
gccgctaaagaagaaaaacagtatttcccgcaaaccatttccgccaatttgttaattagc
cattttaactggttaaaagataacggttataacgtggtgagctggcagcagattattgat
gcggaaaacggcaaaagtactttgccggaaaaagcggtggtgctttcttttgatgatggc
tatgccaccatgtataacgtgatttatccgattctaaaggcctataattatcccgccgtg
tttgccccggtaagcagttggttggatacgccggtaaaccaattaattccttatgccaac
atcaaacttccacgtaacgtttttgttacttgggagcaggtgcgtgaaatggaacaaagt
ggcttggtggaaatcgcctcccacacggataatttacaccatggtgtgcgtgccaatccg
gcgggcagccaacttccggcggtggtagcaccggaatataaaaataatcgatacgagagc
aaaacggagtataaaaatcgtttagttcaggatttttcccgctcatcaaaaagcattcaa
cgtcaaatcggtaagaaaccgcgtattatggtatggccttacgggcaatttaatgacgtt
gccatagacgcggcaaagcaatcgggaatgacgcatcactttgctttagggcagaaaatt
attaataaaattggtgatagatacgtcggtcgtttattaattgacacggaaaccggtttc
tccaccattaaaaatttccttgatggtgtggatgatgaaagtaaattgatgcgcatagtc
catattgatctcgactctctttatgacgccgataaaaaacaacaggcaaagaattttgat
aaattaattgagcgtatgtatcgttatggtattactacggtttatctgaaagcgttttcc
gatccggacggcgatggcgttgccgatgcgttgtatttcccgaatcgttatttaccggtg
cgggatgatattttcagtcaaattgcctggcagctcagaacccgtgccaacgtgaaggta
tatgcgtggatgccggttttggcgtttgacttgcgcaatcatgttaaagaggcaacctat
gtggtagatcaccgcacaaaccaaccggcaaaagataaatacttacgcctttcgccgtat
gaccgaaagaatgtggagatgattaagtctatttataatgatttatcattctatgcaaaa
tttgacggaattttattccatgatgatgcgtttttaacggattttgaaggcgtagaaagc
catagtgaaggtgatggcgtgactgccgctgcaaaacaaaaaacgttagatttaattggt
gtgactgatgagctgacgaacgcgctgaaaccttatttcctaagtagtacgcccgcccta
aaaaccgtgcgtagcttgcatgcgtcggtgattaccaatccgaaagcggaagaatggttt
gcacaaaatctgactaccttaactaaacactatgatactacggcaattatggcgatgcct
tacatggaacatcatcagacaatttccgccaaacaagcggaaaaatggtttgctgccctg
attcagcgggtcaaagcacaggcaccgttaaataaagtgttatttgaattccagtcggtg
aatttgaaaaccaaacagccaattcctgaaacagaattgattagctggattgaattgttg
caacgcaacggtatctatagttacggctactatccggataattttgttgccgatcagccg
aatatgcaaaaaatgagacgttatatgtctctgaatactcaagcaggtaaaccatag
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