Aggregatibacter actinomycetemcomitans D11S-1: D11S_0215
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Entry
D11S_0215 CDS
T00993
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
aat
Aggregatibacter actinomycetemcomitans D11S-1
Brite
KEGG Orthology (KO) [BR:
aat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aat03021
]
D11S_0215
Transcription machinery [BR:
aat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D11S_0215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DUF6890
UCR_14kD
HTH_25
Motif
Other DBs
NCBI-ProteinID:
ACX81631
LinkDB
All DBs
Position
195424..196272
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AA seq
282 aa
AA seq
DB search
MDKETQTMMLVPQGSIEAYIRAANEYPMLTAEEEKELAERLYYKEDIEAAKKLVLSHLRF
VIHVARGYSGYGLPQADLIQEGNIGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNENEVDMVANELGVSPQDVMEMESRMTGADV
AFDLPGDEHDEETYAPALYLEDKSSNFAAELENENYEAQATDQLAVALDNLDARSQDIIK
ARWLDETKATLQDLAAKYNISAERVRQLETNALKKLKSAVVF
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggataaagaaactcaaacaatgatgctcgttccgcaaggcagtatagaagcttatatt
cgtgcggcaaatgaatatccaatgctgaccgccgaagaagaaaaggaattggcagagcgt
ttgtattacaaagaagatattgaagcggcgaaaaaattagtgttgtctcatttgcgcttt
gtgattcacgtcgcgcgcggttattccggttacggcttgccgcaagcggatttaatccag
gaaggtaacatcggcttaatgaaagcggtaaaacgcttcaacccggaagtaggcgtgcgc
ttggtttctttcgctgtgcactggatcaaagcggaaattcacgaatatgtgttgcgcaac
tggcgtattgttaaagtcgccaccaccaaagcgcaacgcaaattgttcttcaacctacgc
aaaactaagcaacgcttaggctggttcaacgaaaacgaagtggacatggtcgccaatgaa
ctcggtgtatcgccgcaagatgtcatggaaatggagtcacgcatgaccggcgccgatgtg
gcattcgacctgcccggcgatgagcatgacgaagaaacctatgcgccggcattgtatttg
gaagacaaaagctccaactttgccgccgaattggaaaacgaaaactacgaagcacaagcc
accgatcagcttgccgtcgcgttagacaatcttgatgcacgcagccaagacattatcaaa
gcccgctggttagatgaaaccaaagctacgttgcaggatttggcggcgaaatacaacatt
tccgccgaacgtgttcgccagttagaaaccaatgccttgaaaaaactcaaaagtgcggtg
gttttctaa
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