Aggregatibacter actinomycetemcomitans D11S-1: D11S_1203
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Entry
D11S_1203 CDS
T00993
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aat
Aggregatibacter actinomycetemcomitans D11S-1
Brite
KEGG Orthology (KO) [BR:
aat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aat03016
]
D11S_1203
Enzymes [BR:
aat01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
D11S_1203
Transfer RNA biogenesis [BR:
aat03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D11S_1203
Prokaryotic type
D11S_1203
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Nrd1-Seb1_dom2
Motif
Other DBs
NCBI-ProteinID:
ACX82585
LinkDB
All DBs
Position
1117363..1118280
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AA seq
305 aa
AA seq
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MSKPRKRGRDIHGVFLLDKPQGMSSNDVMQKVKRIFQANKAGHTGALDPLATGMLPICLG
EATKFSQFLLDADKRYLVTAKLGERTDTSDAEGQVVETRPINVKTPEILTALEAFRGDIL
QVPTMFSALKHNGKPLYEYARAGITVEREARPITIFELNFIEYHAPYLTLEVHCSKGTYI
RTLVNDLGEALGCGAHVTMLRRTAVADYPTEKMMSWDDLQALAEQQDLAVLDALLLPMDT
AVAKLSALILDESQTQGIGFGQRIKFDNPSKRQGQVRLFSHENRFLGVAVIDENNVIRPQ
RLVVY
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccgcgtaaacgtgggcgtgatattcacggcgtgtttttgctggataaaccg
caaggaatgtcttccaacgacgtcatgcaaaaagtaaaacgcatttttcaggcgaataaa
gccgggcatacgggggcgttggatccgttagctacgggaatgttgcctatctgcttgggc
gaagctaccaaattttcccagtttttgttggacgccgataaacgttatttagtcacggcg
aaactaggcgaacgcaccgatacctctgatgcggaggggcaggtggtggaaacccgcccg
attaacgtaaaaacacctgaaattttgaccgcacttgaggcttttcgtggcgatattttg
caagtaccgaccatgttttccgccttgaagcataacggcaagcccctttatgaatatgcc
cgtgccggtattacggtggaacgggaagcccgccccattacaatctttgaattgaacttt
attgaataccacgcgccgtatttaaccctcgaagtgcattgctccaaaggcacttacatt
cgtactttagtgaacgatttaggcgaggcccttggctgtggcgcgcacgtcaccatgcta
cgtcgcacggcagtggcggattacccgacggaaaaaatgatgagttgggacgacttacaa
gccttggcggaacaacaagatttagcggtgttggatgcacttttgttaccgatggatacc
gccgtagcgaaactctcggcgttaatcttggatgaaagccaaacccaaggtatcggattc
ggtcagcgtataaaattcgataacccgtcaaaacgacaaggtcaagtgcggttattttcc
catgagaatcgctttctcggcgttgcggtgattgatgagaataatgtgattcgaccacag
cgattggtggtgtattga
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