Aggregatibacter actinomycetemcomitans D11S-1: D11S_1325
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Entry
D11S_1325 CDS
T00993
Symbol
sbcB
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
aat
Aggregatibacter actinomycetemcomitans D11S-1
Pathway
aat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
D11S_1325 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aat03400
]
D11S_1325 (sbcB)
Enzymes [BR:
aat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
D11S_1325 (sbcB)
DNA repair and recombination proteins [BR:
aat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
D11S_1325 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D11S_1325 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D11S_1325 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
ECT2_BRCT0
Motif
Other DBs
NCBI-ProteinID:
ACX82707
LinkDB
All DBs
Position
1252352..1253779
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AA seq
475 aa
AA seq
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MMAKNDFSFFIYDYESFGVNPATDRPAQFGGIRTDEDFNIIGEPIVLYCKQTNDYLPAPE
AVLVTGITPQECNEKGLWEPEFAAKILQEFSRPNTCVMGFNNIRYDDEMTRYTFYRNFID
PYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPLDDEGMPSFRLEKLTEANGIAHDSAHD
AMSDVYATIEMAKLIKRKQPKLFQYFFENRGKKEVEKLIDTAEMMPLVHVSGMLGNYRGN
TTLIAPLTWHPTNKNAVIVCDLTADIDDLLTKSVGELRENLYTKKETLLAAGALPVPLKL
IHINKCPIVAPAKTLLPQNAERLGIDQELCAQNRQRLQEAKDIRQKVMDIFHQEREFDAS
DNVETELYNGFFSDADKNNMAILRSLEPEKLAKHNLSFQDPRIPELLFHYRARHFYRTLN
RAEQIKWQKYCRKKLDAEALQFEQRLQELAEQYSNNEENLMLLQKVYEYGTKIIG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaaaaaacgactttagtttttttatttatgattatgaaagttttggggtcaat
cccgcaacggatcgcccggcacaattcggtggcattcgcactgacgaggattttaatatt
atcggtgagccgattgttctttattgcaagcaaactaacgattatttgcctgcaccagaa
gcggttttagtcaccggaattacaccacaggaatgcaacgaaaaagggctgtgggaaccc
gaatttgccgccaaaattttacaggaattcagccgtccgaatacttgcgtgatgggcttt
aataacattcgttatgacgatgaaatgacccgttatacgttttaccgtaattttatcgat
ccttatgaatacagctggaaaaacggcaattcccgttgggatttactggatttggtgcgt
gcttgctatgcgttgcgcccggacggtattgaatggcctttagatgatgaaggtatgccg
agtttccgcctggaaaaactgacagaggccaatggaatagcgcacgatagtgcgcatgat
gccatgtcagatgtgtatgccactattgaaatggcaaagctcatcaagcggaaacagcct
aaattattccaatatttctttgaaaatcggggtaaaaaggaggttgaaaagctcatcgat
accgcagaaatgatgccattggtacatgtgtcgggaatgttggggaattatcgcggaaat
accacgttaattgcacctttaacctggcatccgacgaataaaaatgccgttattgtctgt
gatttaactgccgatattgatgatttattaacaaaatcggtaggggagttgcgtgaaaat
ctttacaccaaaaaagagaccttattggctgccggtgcattgcctgtgccattgaagctc
attcatatcaataaatgtccgattgttgcgccggctaaaactttgttgccacaaaacgcc
gaacgtttaggtattgatcaggagttatgtgcgcaaaaccgacaacgtttgcaggaagca
aaagatattcgccaaaaagtaatggatatttttcatcaggaacgtgaatttgacgcttcc
gataatgttgaaaccgaactgtataacggcttttttagtgacgccgataaaaacaatatg
gcgattttacgcagtttggaacccgaaaaattggctaaacataatcttagttttcaagat
ccacgaattcctgaattgctgttccattatcgtgccagacatttctatcgtacattgaac
cgtgcggaacaaattaaatggcaaaaatactgccgtaaaaaattagatgccgaggctttg
caatttgaacaacgtcttcaagaattagccgaacaatattccaacaatgaagaaaatctt
atgttattgcaaaaggtctatgaatatggaacgaaaataatcggttaa
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