Aggregatibacter actinomycetemcomitans D11S-1: D11S_1336
Help
Entry
D11S_1336 CDS
T00993
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aat
Aggregatibacter actinomycetemcomitans D11S-1
Brite
KEGG Orthology (KO) [BR:
aat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aat03032
]
D11S_1336
03400 DNA repair and recombination proteins [BR:
aat03400
]
D11S_1336
Enzymes [BR:
aat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D11S_1336
DNA replication proteins [BR:
aat03032
]
Prokaryotic type
DNA Topoisomerases
D11S_1336
DNA repair and recombination proteins [BR:
aat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D11S_1336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
DUF4795
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ACX82718
LinkDB
All DBs
Position
complement(1261338..1263944)
Genome browser
AA seq
868 aa
AA seq
DB search
MSKSLVIVESPAKAKTINKYLGNNYVVKSSVGHIRDLPTVGSSTGEKAKAISTKGLSAEE
KQAIKHKKEQEALVKRMGIDPYHSWKANYQILPGKEKVVAELKSLAKKVDHIYLATDLDR
EGEAIAWHLREVIGGDDERYSRVVFNEITKNAIKQAFEHPEHLNMDRVNAQQTRRFLDRV
VGFMVSPLLWKKVARGLSAGRVQSVAVKLIVEREREIKAFVPQEYWEVSVLTNTPKGDEI
RLDVVQFKGKKFEPKNAEQAQSAVDFLSKSDYVISDLETKPTSSRPRAPFITSTLQQTAS
TRLGFGVKKTMMLAQRLYEAGYITYMRTDSTNLSQDALNMVRGYIEKQYGQTYLPAKPNF
YSSKENAQEAHEAIRPSDINVGLDDLAGMEKDAVRLYDLIWRQFVACQMPAAQYDSTTLT
VTAGDYSLTAKGRILRFDGWTKVLLQQSKSAEDQALPAVSVNDKLNLSEVQPQQYFTKPP
ARFSEAALVKELEKRGIGRPSTYAAIISTIQERGYVRTENRRFYAEKMGEIVTDRLNQSF
ADLMNYDFTANMEDVLDQIASGDKNWKTELNQFFKDFSTQLTKAELDELEGGMRPNNLVE
TDICCPTCGRNMAIRTASTGVFLGCTGYALPPKARCKTTINLVPEAELLNVLDDASETKA
LMERKRCPKCGTAMDSYIIDPHRKLHICGNNPNCDGYLVEEGKFKIKGYDGPIVECDKCG
GDMHLKLGRFGKYMACTQCDNTRKILKNGEVAPPKEEPIHFPELKCEKSDAYFVLRDGAG
GVFMSAHNFPKSRETRAPKVAELALYRERLPEKLSYLADAPQTDPEGSEAIIRFSRKEKR
QYVTSEKNGKATKWIVDFVDGKWVERKK
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatccttagttattgtggagtcgccggcaaaggcgaaaaccattaataaatat
ttaggaaacaattatgtagtgaaatccagcgtggggcatattcgcgatttgccaaccgtg
ggttcctccactggagaaaaagccaaagccatttccaccaaagggctcagtgcggaagaa
aaacaggcgataaaacacaaaaaagaacaggaagctttagtcaaacgcatgggcattgac
ccttatcacagttggaaagccaactatcagattctccccggcaaagaaaaagtggttgcc
gaactgaaatctctcgcaaaaaaagttgatcatatttacctcgccaccgatttggataga
gaaggagaggcgattgcctggcatttgcgtgaagtcatcggcggcgatgatgaacgttat
agccgcgtggtgtttaatgaaattaccaaaaacgccattaaacaagcctttgaacacccc
gaacatttgaatatggatcgcgttaacgcacagcaaacccgccgctttttggaccgcgtg
gtaggctttatggtctcaccgttactttggaaaaaagtggcgcgcggtttatctgccggt
cgtgtgcaatcggtggcggtgaagttaatcgttgagcgtgaacgtgaaattaaggctttc
gtgccacaggaatattgggaagtctccgtgctcaccaatacaccgaaaggcgatgaaatt
cgcttggatgtggttcaatttaaaggtaagaaattcgagccgaaaaatgccgagcaggcg
caaagtgcggtggattttttaagtaaatccgactatgtgatttccgatttggaaaccaag
ccgaccagttcccgcccaagagcgccgtttattacctcaaccttacaacaaaccgctagc
acccgtttaggcttcggtgtgaaaaaaaccatgatgttggcgcaacgtttgtatgaagcc
ggttacatcacttatatgcgtaccgactccaccaatttaagccaggatgcgctgaatatg
gtacgcggctacattgaaaaacagtacggtcaaacctatttgccggcaaaaccgaatttt
tattccagcaaagaaaatgcgcaggaagcccatgaagctattcgtccgtccgatatcaat
gtgggcttggatgacttagcgggcatggaaaaagacgcggtgcgtttatatgatttaatc
tggcgtcaatttgtggcatgtcaaatgcctgcggcacaatatgacagcacaacattaacc
gtaacagcgggggattacagtttaaccgcgaaagggcgcattttacgttttgacggttgg
accaaagtgttactgcaacaaagtaaatctgcagaagatcaggcgttaccggcggtttcc
gttaacgataaacttaacttgtcggaagtgcaaccgcagcaatatttcaccaaaccgccg
gcacgtttctctgaagcagcgttggtaaaagaattggaaaaacgtggtatcggccgtcct
tccacttatgcagcgattatctctacaattcaggaacgcggttatgtacgcaccgaaaat
cgtcgtttctatgcggaaaaaatgggggaaatcgtaacggatcggttgaatcagtctttc
gccgatttaatgaactacgatttcaccgctaatatggaagacgtgctggaccaaattgct
tccggggataaaaactggaaaaccgaattaaaccaattcttcaaagacttctcgacccaa
ttgaccaaagcggaattagatgaattggagggcggtatgcgcccgaataatttggttgag
acggatatttgttgcccgacttgcggtcgcaatatggcgatcagaaccgccagtacaggc
gtattcttaggctgcaccggctatgccttaccaccgaaagcacgttgcaaaaccaccatt
aacctggttcctgaagcggaactattaaatgtgttggacgacgcgtcggaaaccaaagcg
ctaatggaacgtaaacgctgcccgaaatgcggtacggcgatggacagttatattatcgat
cctcatcgaaaactacatatttgcggcaataacccgaattgtgacggctatttagtcgaa
gaaggtaagtttaagattaaaggttatgacggcccaatcgttgaatgcgataaatgcggc
ggtgatatgcaccttaaactggggcgcttcggtaagtatatggcgtgtacacaatgcgat
aatacgcgcaaaattctgaaaaacggcgaagtggcgccaccgaaagaagaaccgattcat
ttcccggaattaaaatgcgaaaaatccgatgcttatttcgtcttgcgagatggtgcgggc
ggggtgtttatgtccgcgcataatttcccgaaatcccgtgaaacccgtgcacctaaagtg
gcggaattggcgttatatcgtgagcggctgccggaaaaattaagctatctggctgacgca
ccacaaacggatccggaaggcagtgaagccatcattcgctttagtcgtaaagaaaaacgt
caatatgtcacctccgaaaagaatggcaaggcgacaaaatggatagtggattttgttgat
gggaagtgggtagagcgaaagaaataa
DBGET
integrated database retrieval system
