Aggregatibacter actinomycetemcomitans D11S-1: D11S_1424
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Entry
D11S_1424 CDS
T00993
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
aat
Aggregatibacter actinomycetemcomitans D11S-1
Pathway
aat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D11S_1424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aat03400
]
D11S_1424
Enzymes [BR:
aat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
D11S_1424
DNA repair and recombination proteins [BR:
aat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D11S_1424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
AAA_11
Helicase_RecD
UvrD_C_2
Viral_helicase1
AAA_22
SH3_13
SLFN-g3_helicase
UvrD-helicase
AAA_16
NTPase_1
DEAD
nSTAND3
ResIII
AAA_7
TrwB_AAD_bind
UvrD_C
T2SSE
CbiA
AAA
AAA_18
AAA_24
NACHT
AAA_28
NPHP3_N
PIF1
PhoH
MeaB
SRP54
ATPase
DUF7226
Flavi_DEAD
HerA_C
DO-GTPase1
MobB
Motif
Other DBs
NCBI-ProteinID:
ACX82806
LinkDB
All DBs
Position
complement(1348602..1350581)
Genome browser
AA seq
659 aa
AA seq
DB search
MLALLSQLKEKGIINAADYYFAEFIHRKQQPFHYAPSIQNLAVLMAALCNFSYRQGNTCI
LLNHATEQDLFGLQDYFNERVYLTDIQQKIDYLPIERWQAALLTVQHIAFTTAPLQQIAP
LVLQFDRLYFYRIWQDEFRIADYFKSAVRFQHVFSAEQMAQIAPILNRYFHEEQGIDWQK
IAVAMALRQRFCLITGGPGTGKTTTVTKLLSTLQELHQNGLRIKLVAPTGKAAARLTESI
VDAVDRLKQTFSTEKHEREIIENLRIPMNAETIHRLLGVRFFSEETRYHADNPLPVDVLV
VDEASMIDLTLMAKLLNALKPETKLILLGDKDQLASVEAGAILGELGRFVNASAPTYSHA
MAQYLQATTGIPLDTSDSVNPIGDSICYLQVSRRFGANPEVGALAAAVNSGDAVKSWQLL
QQYQQHQAKKCGVYLTDFAHYLTNKEDSQQRKTCVKLIVERAAEEYRRYLQLISQEGQMD
EEKVQSIFAAFNGIRFLTALRVGEFGVEQLNLAIAEKLRQKRLLQFHQEREWYIGKPIMV
TQNDGNVGLYNGDIGMYLGNGRVWFEQGQNSYKTVLASRVPNHETAFVMTVHKSQGSEFP
HTFLILPLENSPVLSKELVYTGITRTKDFLTVFALQSVWESAVKNPVQRQSGLGQLLEI
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgttagctttattatcccaactcaaagaaaagggcatcatcaacgccgctgactattat
ttcgccgagtttattcaccgcaaacaacagccttttcactatgcaccgtctatccagaac
ctggcggtgcttatggcggcgttgtgcaacttcagttatcggcagggcaacacctgtatt
ttactgaatcacgccacggagcaggatttgttcggtttacaggattattttaacgaacgc
gtttatttaacggatattcagcaaaaaattgattatttgcccattgaacgctggcaggca
gcattgctgacggtgcaacatatcgctttcaccaccgcgcctttgcaacagatcgcgccg
ttggtgttgcagtttgaccgcttgtatttttatcgcatctggcaggatgagtttcgtatc
gccgattactttaaaagtgcggtccgttttcaacacgttttttcagccgaacagatggcg
caaatcgccccgattttgaaccgctattttcatgaagaacagggcatcgactggcaaaaa
attgcggtggcgatggcgttgcgtcaacgcttttgcctcattaccggcgggccgggcacg
ggcaaaaccactaccgtcaccaaactcctatcgaccttgcaagagcttcatcaaaacggc
ttgcgcattaaacttgtcgctccgactgggaaagcggcggcacggcttacggaatccatt
gtggacgcagtggatcgtctgaaacaaactttttcgacggagaaacacgaacgggaaatc
atcgaaaatctgcgcattcccatgaacgcggaaaccattcatcgcttgctcggcgtgcgt
tttttcagtgaagaaacccgctatcacgccgacaatcctttgccggtggatgtgttggtg
gtggacgaagcgtctatgatcgatttaaccttgatggcgaagctgctcaatgcccttaaa
ccggaaaccaaattgattttattgggtgataaagaccaactggcttctgtagaagccggg
gcgattttgggcgaattagggcgtttcgtgaatgcgtcggcgccgacgtatagccacgca
atggcacaatatttacaggcgaccacaggcattcctcttgacacgtcggatagcgtcaat
cctatcggtgatagcatttgttatttgcaggtcagccgccgtttcggggcaaatccggaa
gtgggtgcgttggcggctgcggtgaattcaggcgacgcggtgaaaagctggcagttattg
cagcaatatcagcaacatcaagcaaaaaaatgcggcgtatatttaactgattttgctcat
tatttgaccaacaaagaagatagtcagcaacgtaaaacctgtgtgaagctcatcgtggaa
cgtgcggcggaggaatatcgtcgttatttgcagttgatttcacaagaagggcagatggat
gaagaaaaagtgcagtcgattttcgcggcgtttaacggtattcgttttttaacggcgttg
cgtgtgggcgaattcggcgtggagcaattaaatctcgccatcgcagaaaaattacgccaa
aaacgcctgttgcaatttcatcaggaacgggaatggtacatcggcaaaccgattatggtg
acgcaaaatgatggcaatgtgggcttgtataacggtgacatcggcatgtatttgggaaac
ggacgggtatggttcgagcagggacaaaacagttataaaactgtgctggcaagccgcgtg
ccgaatcatgaaaccgccttcgtcatgacggtacacaaatcccaaggttcggaatttccg
catactttcctgattttgccgttggaaaacagccccgtgttatccaaagaactggtttac
accggcatcacccgcaccaaggattttttaacggtgttcgcgctacaaagcgtatgggaa
agtgcggtgaaaaatccggtgcaacggcaaagcggattgggtcaattactggaaatctaa
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