Aggregatibacter actinomycetemcomitans D11S-1: D11S_1589
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Entry
D11S_1589 CDS
T00993
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
aat
Aggregatibacter actinomycetemcomitans D11S-1
Pathway
aat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D11S_1589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aat03400
]
D11S_1589
DNA repair and recombination proteins [BR:
aat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D11S_1589
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D11S_1589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
UB2H
AAA_30
AAA_22
Ish1
eIF3_p135
DUF7018
DUF87
Motif
Other DBs
NCBI-ProteinID:
ACX82954
LinkDB
All DBs
Position
complement(1516782..1518824)
Genome browser
AA seq
680 aa
AA seq
DB search
MSEKINTKPFILHSHFKPSGDQPQAIAKLAENLEDGLAHQTLLGVTGSGKTFTIANVIAQ
LNRPAMVLAPNKTLAAQLYAEMKDFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASI
NDQIEQMRLSATKSFLERRDTIVVASVSAIYGLGDPDSYLKMMLHLQQGAIINQRQILAK
LAELQYTRNDQAFQRGTFRVRGEIIDIFPAESDDRAVRIELFDGEIERLSLFDPLTGSSF
GTVPRFTVYPKTHYVTPRERILDAIEKIKLELAQRREYFTKENKLLEEQRISQRTQFDIE
MMNELGYCSGIENYSRYLSDRNEGEPPPTLFDYMPSDAILIIDESHVTVPQIGGMYRGDR
SRKETLVEYGFRLPSALDNRPLRFEEFERLAPQTIYVSATPGPYELEKSGGEIIDQVVRP
TGLLDPQIEIRPVSIQVDDLLSEARHRADKNERVLVTTLTKKMAEDLTDYLDEHGIRVRY
LHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSL
IQTIGRAARNLHGKAILYADNITKSMEKAITETNRRREKQAKYNEAQGIVPQALNKKVGE
LLDIGQGANQKAKANKQRGKTVAEPTALYTTPKSPKEYQQQIKKLEQQMYKFAQDLEFEK
AAATRDQLQQLRESFMLSSE
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaaaattaacactaaaccttttattcttcattcccatttcaaaccctccggc
gaccaaccccaggccatcgcaaaattagccgaaaatttagaagatggcttggcacatcaa
accttgcttggggtaacaggttcaggcaaaacctttaccattgccaatgtgattgcgcaa
ttgaatcgccctgcgatggtgttggcaccgaacaaaacccttgccgcccaactttatgcc
gaaatgaaggattttttcccggaaaatgcggtggaatattttgtttcttactatgattat
tatcagcccgaagcctatgtgccgagtagcgatacttttattgagaaagacgcgtctatt
aatgatcaaattgaacaaatgcgactttccgccacaaaatctttcttagaacggcgcgat
actattgtagtggcgtccgtgtccgctatttatggcttaggggaccccgattcctattta
aaaatgatgctgcatttgcaacaaggcgcgattattaatcagcgccaaatcttggcaaaa
ttggcagagttgcaatatacccgtaacgatcaggcgtttcagcgcggaacgttccgtgtg
cggggagaaattattgatattttcccggcggaatcggacgatcgagcggtacgtatcgaa
ttatttgatggtgaaatcgaacgcttgagtttatttgatccgctcaccggcagcagcttc
ggcacggtgccgcgctttaccgtttatccgaaaacccactatgttacaccgcgtgagcga
attttagacgccatcgaaaaaattaaactggaattggcgcaacggcgggagtatttcact
aaagaaaataaattattggaagaacaacgtatcagccaacgtacccaatttgatattgag
atgatgaatgaactcggttattgctcgggcattgaaaactattcccgctatttatcagat
agaaatgagggcgaaccgccaccgaccttatttgattatatgccgtctgacgcaattttg
attattgacgaatcccacgtcaccgtgccacaaatcggtgggatgtatcgcggcgatcgc
tcccgtaaagaaaccttggtggaatatggttttcgtctgccttctgcgttggataaccgt
ccgttacgttttgaagaatttgaacgtttggcaccgcaaaccatttatgtttccgccaca
ccgggaccgtatgaactggaaaaatccggtggggaaattatcgaccaagtagtgcgtccg
acaggtttgcttgatccgcaaattgaaattcgcccggtatctattcaggtggatgattta
ctttccgaagcacgccacagagcggataaaaatgaacgcgttttagtgacgacattaacg
aagaaaatggcggaagatcttaccgactatttagatgaacatggtattcgcgtacgttat
ttgcattctgatattgatactgtcgaacgggtggaaattattcgtgatttgcgcttgggg
gaatttgatgttttagtcggcattaacttattacgggaaggtttagatattccggaagtg
tctttagtggcaattttagatgcggataaagaaggttttttacgttccgagcgttcatta
attcaaacgatcggacgtgctgcgcgaaatttacacggaaaagccattttgtatgcggat
aatataaccaaatcaatggagaaagctattaccgaaaccaatcgtcggcgtgagaaacaa
gcaaaatataatgaagcacagggcattgtgccgcaggcattaaataaaaaggtaggcgag
ttgttagatatcggtcagggtgccaatcagaaagccaaagccaataaacaacgtggaaaa
acggtggcagaaccgaccgcactttatacaacgccgaaatcaccgaaagaatatcagcaa
cagattaagaaacttgagcagcaaatgtataaatttgcacaggatttggaatttgagaaa
gctgctgcaacgcgcgatcagttacaacaattacgggaaagttttatgttatcaagtgag
taa
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