Aggregatibacter actinomycetemcomitans D11S-1: D11S_1964
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Entry
D11S_1964 CDS
T00993
Name
(GenBank) double-stranded RNA-binding protein
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
aat
Aggregatibacter actinomycetemcomitans D11S-1
Pathway
aat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
D11S_1964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aat03019
]
D11S_1964
03009 Ribosome biogenesis [BR:
aat03009
]
D11S_1964
03036 Chromosome and associated proteins [BR:
aat03036
]
D11S_1964
Enzymes [BR:
aat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
D11S_1964
Messenger RNA biogenesis [BR:
aat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
D11S_1964
Ribosome biogenesis [BR:
aat03009
]
Eukaryotic type
90S particles
RNase
D11S_1964
Prokaryotic type
rRNA processing factors
D11S_1964
Chromosome and associated proteins [BR:
aat03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
D11S_1964
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
Phage_P2_GpU
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
ACX83318
LinkDB
All DBs
Position
1889682..1890362
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AA seq
226 aa
AA seq
DB search
MKENQLERLQRQINYRFQNIELLKQALTHRSAGHQHNERLEFLGDAILNLTIGEALFHQF
PKCNEGELSRMRATLVREPTLALLARDFKLGDYILLGQGELKSGGFRRESILADCVEAII
GAISLDSSLTNATQIVCQWYQNLLKEIKPGDNQKDAKTRLQEYLQGNRLPLPTYNIVNIQ
GEAHNQLFIVECSIQNSDRTFIGKGSSRRKAEQAAAEQILQELNIK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaatcaattagaacgtttacaacgtcaaattaactacaggttccaaaatatc
gagttgcttaaacaggctttaacccatcgtagcgccggacatcaacacaatgagcggttg
gaatttttaggcgatgccattttgaatttaaccatcggcgaagccttgttccatcaattc
ccgaaatgtaacgaaggggaattgagccgtatgcgtgccaccttggtgcgcgaaccgacc
cttgcccttctggcgcgggattttaagctgggtgattatattttgctcggtcaaggggaa
ttaaaaagtggcggtttccgccgtgaatctattctggcggattgcgtggaagccattatc
ggcgcgatttcactggacagcagtctgacaaatgccacacaaattgtgtgtcagtggtat
cagaatttattgaaagaaattaaaccgggcgacaatcaaaaagatgcgaaaacccgcttg
caggaatatttacaaggcaatcgcctgcctttgccgacatacaatatcgtgaatattcaa
ggagaagcccataatcaattgttcatcgtggaatgttccatccaaaatagtgaccgcact
tttatcggtaaaggctccagtcgtcgtaaagcggaacaggcggcggcagaacaaatttta
caagagttgaatatcaaatga
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