Aggregatibacter actinomycetemcomitans D11S-1: D11S_2106
Help
Entry
D11S_2106 CDS
T00993
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
aat
Aggregatibacter actinomycetemcomitans D11S-1
Pathway
aat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D11S_2106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aat03019
]
D11S_2106
Messenger RNA biogenesis [BR:
aat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
D11S_2106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
ACX83460
LinkDB
All DBs
Position
complement(2018620..2019219)
Genome browser
AA seq
199 aa
AA seq
DB search
MIDSDGYRPNVGIVICNNKGQVLWAKRYGQNSWQFPQGGINCSETPEQAMYRELFEEVGL
TRKDVRVLHASKHWLRYKLPKRLLRSDSKPMCIGQKQRWFLLELIGDSKNINMQCSKIPE
FDGWRWVSFWYPVRQVVSFKKEVYRKAMKEFASVLFDENNKGLLQPKELSASEENRRVSP
SKKHNNSKHSKRPSYKYKG
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgactccgatggctaccgtccgaatgtaggcattgttatttgcaacaataagggg
caagtgctgtgggcgaagagatacggacaaaactcctggcaatttccgcagggcggaatt
aattgtagtgaaacgcccgagcaggcgatgtatcgcgaattgtttgaggaggtgggttta
acacgcaaagatgtgcgggtgctgcatgcttccaaacattggttacgttataagttgccg
aaacgtttgttgcgttctgattctaaaccaatgtgtatcggacaaaaacaacgttggttt
ttactggaactcatcggcgacagcaaaaatatcaatatgcaatgcagcaaaatcccggaa
ttcgacggttggcgttgggtcagtttttggtatccggtgcgtcaggtggtgtctttcaaa
aaagaagtatatcgcaaggccatgaaggaattcgcctcggtgttatttgatgaaaataac
aaagggttattgcaaccgaaggaactaagtgcgtcggaagaaaataggcgcgtttccccg
tcgaaaaaacacaacaattccaaacattcaaaacgcccatcatataaatacaaaggataa
DBGET
integrated database retrieval system
