Paenarthrobacter aurescens: AAur_1587
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Entry
AAur_1587 CDS
T00447
Name
(GenBank) metallo-beta-lactamase family protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
aau
Paenarthrobacter aurescens
Pathway
aau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAur_1587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aau03019
]
AAur_1587
Messenger RNA biogenesis [BR:
aau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AAur_1587
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
YicC-like_C
DUF459
Motif
Other DBs
NCBI-ProteinID:
ABM07198
UniProt:
A1R541
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Position
1731624..1733315
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AA seq
563 aa
AA seq
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MTQTALPGLVTPPKLPKGTLRIVPLGGLGEIGRNMAVFEIDGKLLVVDCGVLFPEETQPG
VDLILPDFSYIEDRLQDIVGVVLTHGHEDHIGAVPYLLRLKADIPLIGSQLTLALVEAKL
QEHRIKPYTLTVTEGQVEQFGPFECEFVAVNHSIPDALAVFIRTEGGNVLHTGDFKMDQL
PLDGRITDLRHFARLGEEGVDLFMADSTNADVPGFTTAEKEIGPTLDRLFGQAKKRIIVA
SFSSHVHRVQQVLDAAAKHGRKVAFVGRSMVRNMAIAAKLGYLDVPEGILVDIKNIDNMP
DDRVVLMSTGSQGEPMAALSRMANGDHRVVVGKGDTVILASSLIPGNENAVFRIINGLLK
LGADVIHKGTAKVHVSGHAAAGELLYCYNILEPLNAMPVHGETRHLIANGNIALESGVPA
EGIILSDNGTVIDLKDHKANVVGQVEVGFVYVDGSSVGEITDADLKDRRVLGDEGFISVI
TVISRTTGKIVSGPEIHARGVAEDDSVFDEIIPKINAALEDAVLNHTDHTNHQLQQVVRR
IIGTWVNRKLRRRPMIIPVVLEA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaaccgcccttcccggactggttactccgccgaaactgccgaaaggcacactg
cggattgtcccgctcggtggactgggagagattggccgcaacatggcggtcttcgaaatc
gacggcaaactgctggtggttgactgtggcgtgctcttccccgaggaaacccagcccggc
gtcgatttgatcctgcctgatttctcctacattgaggaccgtctgcaggacatcgtaggc
gtcgtgctgacccacggccacgaggaccacattggcgcggttccctacctcctgcgcctc
aaagccgatatcccgctgatcggatcgcagctgactcttgccctggtggaagccaagctc
caggaacaccggatcaagccgtacacgctgaccgtcactgaggggcaggtggagcagttc
ggcccgttcgagtgtgagttcgttgcagtcaaccactccatcccggatgccttggcagtc
ttcatccgaaccgagggcggcaacgtcctccacaccggcgacttcaagatggatcagttg
ccgctggatggccgtattacggaccttcgacacttcgcgcgtttgggcgaagagggcgtg
gacctgttcatggcagactccaccaacgcggacgtaccgggcttcaccaccgccgagaag
gaaatcgggcccaccttggaccggttgttcggacaggccaagaagcgcatcatcgtggcc
tcattctcttcccacgttcaccgtgtccagcaagttctggatgccgcagccaaacatggc
cgcaaggtggccttcgttggccgttcaatggtccgcaacatggctatcgcagccaagctt
ggctacctcgatgtccccgaaggcatcctggtggacatcaagaacatcgacaacatgccg
gacgaccgcgtggttctcatgtccaccggatcgcagggtgagccgatggctgcgctctcc
cgcatggccaacggtgaccaccgtgtggtggtgggcaagggagataccgtcatcctggcc
tccagcctcatcccgggcaatgagaacgccgttttccgtatcatcaatggcctcctcaag
ctcggcgccgatgtgatccacaagggcacggcaaaggttcacgtgtccgggcacgcagcc
gccggtgaactgctctactgctacaacatccttgagcctctcaacgcgatgcccgtccat
ggtgaaacccgccacctgattgccaatggcaacattgcgctcgaatcaggtgtcccggcc
gagggcatcatcctgagcgacaacggcactgtcattgacctcaaagaccataaggccaac
gtggtgggccaggtggaagtcggctttgtctacgtcgatggttccagcgtgggagaaatc
accgacgccgacctcaaggaccgtcgcgtcctgggggatgagggcttcatttccgttatc
acggtcatcagccgcaccaccggcaagatcgtgtccggcccggagatccatgcccgcggt
gtggccgaggatgactccgttttcgacgagatcatccccaagatcaacgccgccctcgaa
gatgctgtgcttaatcacaccgaccacaccaaccaccagttgcagcaagtggtccgcagg
atcatcggcacgtgggttaaccgcaagcttcgccgccgccccatgatcatcccagtggtc
ctggaggcgtag
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