Paenarthrobacter aurescens: AAur_2369
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Entry
AAur_2369 CDS
T00447
Name
(GenBank) putative ribonuclease, Rne/Rng family domain protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
aau
Paenarthrobacter aurescens
Pathway
aau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAur_2369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aau03019
]
AAur_2369
03009 Ribosome biogenesis [BR:
aau03009
]
AAur_2369
Enzymes [BR:
aau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
AAur_2369
Messenger RNA biogenesis [BR:
aau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AAur_2369
Ribosome biogenesis [BR:
aau03009
]
Prokaryotic type
rRNA processing factors
AAur_2369
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
Motif
Other DBs
NCBI-ProteinID:
ABM08590
UniProt:
A1R791
LinkDB
All DBs
Position
complement(2604430..2607759)
Genome browser
AA seq
1109 aa
AA seq
DB search
MMVRTGRHTADFCQRLRVLTIFAPLGAGCGGVAGAGVLPHMDNDQVVAVNDEAAPAETAE
APKKATRTRRKAAPKVAADVEAPAADTPAPEAAPEATKAPVRRTRSRKKAEPAEPLPGLG
DDTTAAPEAAAEAAPEAIAEPAPEKPVRRRRTTKPKAEAVEAPAAAEAVEESTTPEKGSQ
PEAPAADVASEESASEEAASEEAASEEAAAQDAAPAASTSLFMEPVSITSMIFQAPDLTT
VPRVAPVEEKAEEPEEEESEAAAEGELEDAGSRRRRRSRGRRGRRGTERDENEAEDGTES
EDEEAPAAEALEEGVTSRRRRRRRRGDQDLELTGGSDDDPPNTVTRVRAPRPITETAPSN
RVTGVKGSTRLEAKKQRRRESRETGRRRQVITEAEFLARRESVDRQMIVRQRDDRIQIGV
LEDGVLAEHFVSKTQQDSLIGNVYLGKVQNVLPSMEAAFVDIGRGRNAVLYAGEVNWDAV
NLEGQPRRIENALKSGDSVLVQVTKDPVGHKGARLTSQISLPGRYLVYVPGGSMTGISRK
LPDVERNRLKRILKDRLPENAGVIVRTAAEGASEEELTHDINRLRAQWEGIEGQASSTKV
LAPELLYGEPDLTIKVVRDVFNEDFSKLIVSGDDAWDTIEAYVTYVAPDLVGRLEKWTKD
QDIFAAWRIDEQIHKALERKVFLPSGGSLVIDRTEAMTVVDVNTGKFTGSGGNLEETVTK
NNLEAAEEVVRQLRLRDIGGIIVIDFIDMVLESNRDLVLRRMVECLGRDRTKHQVAEVTS
LGLVQMTRKRMGTGLLEVFGEQCEHCAGRGVVTHDEPVEHRRANVVAAEHHRPHAEAQQP
AARTERKRRRGKGGGQAIAEAPAQVHTTTSAPAAPSAPVEAQDPARQAKAEATRAALATI
AAAAHAAHLHDDEVHRAEEQARAAGHEPAVSPASGTAASGEAGATAREAEKREAAVQEAR
STPVLRFGGEEVALPFVEHHEEPQAAKPAMSLDLLAEAFSHLGAAPAPAEEAAPVVVPEP
ADAPKADVPARAEKAPEAVQATSSRRGRRNRSASRAQGAANETSVEHHEVTASAPRGSAH
EAKVPAEQAKKASTDEPIILGVGVPASEL
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcgaaccggaaggcatactgccgacttctgtcaacgcctgcgggttttgaca
atatttgccccactgggcgccggatgtggcggcgtcgctggggcaggagtgttgccacat
atggataatgaccaggttgtagccgttaatgacgaggcagctcccgcggaaactgcggaa
gcgcccaagaaagccaccaggacccggcgcaaggcagcgccgaaggtcgctgctgacgta
gaggcgcctgcggctgacacgcccgcgccggaagcggcccctgaggccaccaaggcgccg
gtgcgccgcacccgttcccgcaagaaggcagagcctgcagagcccttgcccggtttgggg
gacgacaccactgccgcgcccgaagccgccgcagaagccgcgcccgaagcgattgctgag
cctgcccccgaaaagccggtccgccgtcgtcgtactaccaagcccaaggctgaggcagtc
gaggcgcccgcagctgcggaagccgtcgaggaaagcacgacgccggaaaagggctcccag
ccggaggcacctgccgccgatgtagcatccgaggagtccgcatccgaagaggcagcgtcc
gaagaggcagcgtccgaagaggcagctgcccaagacgccgctcctgctgcgtccacctcg
ctgttcatggagccggtttccatcacttccatgatcttccaggccccggacctcaccact
gttccccgcgttgcaccggtggaggagaaggccgaggagcccgaagaagaagaaagcgaa
gccgccgctgagggcgagctggaggacgccggtagccgtcgtcgtcgcaggagccgtggc
cgtcgtggacgccgcggaaccgaacgcgatgagaacgaggccgaggacggcaccgagtcc
gaagacgaagaagctccggcagccgaagcccttgaagaaggcgtcacgtcgcgtcgccgg
cgccgccgccgccgcggagaccaggatcttgaactgaccggcggctcggacgatgatccg
cccaacaccgtcacccgtgtccgcgcaccgcgccccatcacggaaacagccccgtccaac
cgcgttaccggcgtcaaaggttccaccaggcttgaggccaaaaagcagcgtcgccgcgaa
tcccgcgaaaccggacgccgccgccaggtcatcaccgaggccgagttccttgcccgccgc
gagtcggtggaccgccagatgatcgtccgccagcgcgacgacagaattcagatcggcgtc
ctggaagacggtgttctggctgagcacttcgtctccaagacccagcaggactccctgatc
ggcaacgtttacctgggcaaggtccagaatgttctgccttccatggaagctgccttcgtg
gacatcggacgtggccgcaacgcggtcctgtacgccggtgaagtcaactgggacgcagtc
aatcttgaaggccagccacgccggatcgagaacgccctgaagtccggcgactccgtcctg
gtccaggtgaccaaagaccccgtggggcacaagggggcccggctcaccagccagatctcc
ttgccgggccgctacttggtctacgtacccggtggttccatgaccggcatctcccgcaag
cttcccgacgtcgaacgcaaccgcctcaagcgcatcctgaaggaccgcttgccggaaaac
gccggtgtcattgtccgcacagccgctgagggggcgtcggaggaagagctgacgcacgac
atcaaccgtctgcgcgcccagtgggaaggcatcgaaggacaggcctcgtccaccaaggtc
ctggcccctgaactgctttacggcgaacccgacctcaccatcaaggtggtccgtgacgtc
ttcaatgaggacttctccaagctgatcgtctccggtgacgacgcctgggacaccatcgag
gcctacgtcacgtacgttgcccctgatctggtgggccgccttgaaaagtggaccaaggac
caggacattttcgctgcctggcgcatcgacgagcagatccacaaggcgctggagcgtaag
gtcttcctgccgtccggtggttcgttggtcatcgaccgcaccgaggccatgaccgtggtg
gacgtcaacaccggtaagttcaccggcagcggcggaaacctcgaagaaacggtgaccaag
aacaaccttgaagcggctgaggaagtggttcgccagctccgtctgcgcgacatcggcggc
attatcgtcatcgacttcatcgacatggtcctggaatccaaccgcgatctcgtcctgcga
cgcatggtcgagtgccttggccgcgaccgtaccaagcaccaggtggccgaagtgacgtcg
ctgggcttggtccagatgacacgcaagcgtatgggtaccggcctccttgaggtcttcggt
gagcagtgcgagcattgcgccggcaggggcgttgtcacccacgacgagcccgttgaacac
cgccgcgccaacgtggttgccgccgagcaccaccgcccgcacgccgaggcacagcagcct
gcagcgcggacggaacgcaagcgccgccgcggcaagggtgggggacaggccatcgccgaa
gcccccgcgcaggtccatacgacgacgtccgccccggctgcaccttcggctccggtcgaa
gcacaggatcccgcccggcaagccaaggctgaggcaacccgggctgccctggcgacgatt
gccgctgcagcgcacgccgcccacctgcacgacgacgaagttcaccgcgcagaggagcag
gcaagggcggcgggccacgagccggccgttagccccgcatccggtaccgccgccagcggc
gaagccggagcaactgcccgcgaagcagaaaaaagggaagcagcagtccaggaagcaagg
tctactcccgtcctgcgtttcggcggcgaagaagtagcacttccgttcgttgagcaccac
gaggaaccgcaggccgccaagcctgccatgagcctggacctcctggccgaggcgttctcg
cacctcggcgctgctccggcacctgcggaagaagccgcgccggtggtcgtgccggagcct
gctgatgccccgaaggctgatgtgccggcccgtgccgaaaaagctcccgaggctgttcag
gctacgagtagtcgtcgtggccgccgcaaccggagtgccagccgggcccaaggcgcggcc
aatgaaaccagcgtcgagcaccatgaggtgacggcctcggccccccgaggctcggcccat
gaggccaaggtgcccgcggaacaagccaagaaggcatcaaccgacgagcccatcatcctc
ggagttggagttcctgcctccgagctctaa
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