Paenarthrobacter aurescens: AAur_2623
Help
Entry
AAur_2623 CDS
T00447
Symbol
hrpA
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
aau
Paenarthrobacter aurescens
Brite
KEGG Orthology (KO) [BR:
aau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aau03019
]
AAur_2623 (hrpA)
Enzymes [BR:
aau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AAur_2623 (hrpA)
Messenger RNA biogenesis [BR:
aau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AAur_2623 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
HA2_N
AAA_23
nSTAND3
PhoH
AAA_25
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ABM07024
UniProt:
A1R7X9
LinkDB
All DBs
Position
2877000..2880947
Genome browser
AA seq
1315 aa
AA seq
DB search
MTLHISYPAELPVSERREDLMAAIAANQVTIIAGETGSGKTTQIPKMCLELGLGDKGLIG
HTQPRRLAARTVAERIASELDVEIGQEVGFQVRFTGEVSASTKIKLMTDGILLAEIQRDK
LLRKYSTIIIDEAHERSLNIDFILGYLKRILPQRPDLKVIITSATIDPQRFAKHFGSEED
PAPIIEVSGRTYPVEIRYRPLSQPAGGEEDTSDDELEEDRDPLDAVCDAVDELAKEAPGD
ILVFFSGEREIRDAAEAINGRIQTNRRLAGTEVLPLFARLSLQEQHRVFNPGGKRRIILA
TNVAETSLTVPGIKYVIDTGTARISRYSHRTKVQRLPIERVSQASANQRSGRCGRVSEGI
AIRLYSEEDFESRPQFTDPEILRTNLAAVILQMTAMGVARGPKDVENFPFVEPPDSRAIN
DGVTLLRELGALSSPKAGDAQGNGRSGSGLTAVGQKLAQLPVDPRLGRMIVEAGKRGCVR
EVMILAAALTIQDPRERPTDKQQLAAEKHARFRDELSDFTGFLNLWNYIQEKQRELSSTQ
FRKLCRNEFINYLRVREWQDLFTQLRQMAKPLGIVLDNKREADPVGNYEGIHISLLSGLL
SHIGLLDERKREYAGARGSRFAIFPGSALFKKSPAFVMAAELVETSRLWARVAAKFDPLW
AEQVAPDLVKRSYSEPHWSSRQGAVMAHEKVTLYGVPIIPNRRVNYGRIDPELSREMFIR
HALVEGEWKTHHKFFHRNRALLQEIEELETRMRRRDILVDDQTLFDFYDARVGKEVVSER
HFDKWWKDARHTDPALLDFDQSLLMSEDAEALDDSAYPKSWLHKGFELPLSYEFHPVAPG
SAPNPSDGVTAEVPVLFLNQLDDAPFRWQIPGQRVELVTALIKSLPKQIRKNFVPAPDVA
RQATAALEADFDPATDELEPSLELVLRRLRGHVIPPGSWNWDAVPPHLRVSFKVVDSKGK
VLDEGKDLAELQEKLAPATRRAIAESLGATPATTSRAKGGKGTGTSGPPNGQTPAPGATP
AGDGIVAERGGITTWDFSTVERQVTRTVKGHAVTGFPAIVDEGKSVALRVFQTRPEQEAA
MRGGVIRLLALRIPPPDRYVLEHLSNTEKLTFSQNPHGSVSALIADCALAAIDKLVPQDL
PWDKEAFDALYEVVRAELIDTVFTVTAVVERVLASTRRIQKELKSNASLPLISALNDMKS
QLEQLVFPGFVAQTGYAQLSQLPRYLQGIEKRLQKLPGNVQRDSLNMAIIQALEDDYDDA
VSALLPGRRAGTELTRVRWMIEELRVSLFAVELGTAYSVSEKRIRTVLNQALAPA
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atgacacttcatatttcctaccccgcagagctgcccgtatccgagcgccgcgaggatctg
atggcggccatcgccgcaaaccaggtgaccatcattgccggtgagaccggttcgggtaag
accacgcagatccccaagatgtgcctcgaacttggccttggagacaaaggcctgatcggg
catacccagccacgccggttggcggcccgcacagtagccgaacgcatcgcgtctgaactc
gatgtagagatcggacaggaggtgggcttccaggtccgcttcaccggtgaggtcagcgct
tccaccaagatcaagctgatgaccgacggcatcctcctcgcggagatccagcgggacaaa
ctgctccggaaatacagcaccatcatcatcgacgaggcccacgagcgcagcctcaacatc
gacttcatcctgggctacctcaaacgcatcctcccccagcgcccggacctcaaggtcatc
atcacctcggccaccatcgatccccaacgcttcgccaagcacttcggcagcgaggaagat
ccagcgccgatcatcgaggtctccggacgaacttacccggtagagatccggtacaggccg
ttgtcccaacccgccggcggggaggaagatacctcggacgacgaacttgaagaggaccgc
gatcccctggacgccgtatgcgatgccgtggacgagctcgccaaggaagcacccggcgac
atcctcgtcttcttttccggtgagcgtgaaatcagggatgctgccgaggccatcaacggc
cgcatccaaacgaaccggcgccttgccgggacggaagtcctgcccctttttgcccgattg
agcctgcaagagcagcacagggtgttcaaccccggcggaaaacgacgcatcatccttgcc
accaacgtcgccgaaacgtcgctgaccgtgccgggtatcaagtacgtgatcgataccggc
accgcccgcatctcgcggtactcgcaccggaccaaagtccagcggctgcccatcgagcga
gtttcccaggcctcggccaaccagcgctcgggccgctgtgggcgcgtgtccgagggcatc
gccatccgtttgtactcggaagaggacttcgagtcgcgtccgcagttcacggatccggag
atcctccggaccaatctcgctgcggtcatcctgcagatgaccgccatgggcgttgcgcgc
ggccccaaggatgtagagaacttccccttcgtggaaccgccggactcgcgtgctatcaac
gacggcgtcacgctcctgcgcgaactcggcgctttgagttcgcccaaggccggtgacgcg
cagggtaacggtcgcagtggcagtggcctgaccgccgtcgggcagaaacttgcccagctg
ccggtggatccgcggctgggccggatgatcgtggaggccggcaaacgcggctgcgtacgc
gaagtcatgatcctggccgcagcactgaccatccaggacccccgcgaacggcccacggac
aagcagcagcttgccgcggaaaagcatgcacgcttccgggatgagttgtcggacttcacc
ggcttccttaacctgtggaactacatccaggaaaagcagcgcgaactctcctcaacccag
ttccgcaagctgtgccgcaacgaattcatcaactacctgcgtgttcgtgagtggcaggac
cttttcacccagcttcggcagatggccaaacctcttggcattgtgttggacaacaaacgc
gaagctgatcccgtcggcaactacgagggcatccacatcagcctgctctccggattgctg
agccacatcggtctcctggatgagcgcaagcgcgaatacgccggtgcacgcggcagccgc
ttcgcgatcttccccggctcggcgctgttcaagaaatccccggcgttcgtgatggcggcc
gagctcgtggaaaccagccggttgtgggcgcgtgttgctgccaagttcgatcctttgtgg
gccgagcaagtcgccccggacctggtgaagaggtcgtacagcgaacctcattggtcttcg
cggcaaggcgccgtcatggcccatgagaaggtgacgctgtacggcgtgccgattattcct
aaccgccgggtcaactacgggcgcatcgatcccgaactctcccgggaaatgttcattcgc
catgccttggtggagggcgagtggaaaacacaccataagttcttccatcgcaaccgtgcc
ctgctccaggaaatcgaagaactcgaaacccgcatgaggcggcgggacatcctggtggac
gaccagacgctgttcgacttctatgacgcacgcgtgggcaaagaagtggtctccgagagg
cactttgataagtggtggaaggatgcccgccacacggatcccgctctcctggacttcgac
caatcgttgttgatgagcgaagacgccgaggcgctggacgactccgcatacccgaagagc
tggctgcacaagggattcgaactcccgttgagctacgagttccatccggtggcgcccggt
tcggcccctaatccatccgacggtgttaccgctgaagtcccggtgctgttcctgaaccaa
ctggacgatgccccgttccgctggcaaattccggggcaacgtgtagagctggtgacagcg
ctgatcaagtcgctacccaagcaaatacggaagaactttgtgcctgccccggacgttgca
cggcaagcaaccgcagcgctggaagccgatttcgaccccgccaccgatgaactggagccg
tccttggaactggtccttcgccggctccgcggacacgtcattcctccaggctcgtggaac
tgggacgcggtaccgcctcacttgcgcgtgagcttcaaggtggtggacagcaagggcaag
gtgcttgacgaaggaaaggacctcgctgaactccaggagaagctggcgccggcaacgcgc
cgcgccatcgccgaatcgctcggcgccacacccgcgacgacgtcacgcgccaagggcggc
aagggaaccggcacgtcgggcccacccaacggtcaaacgccagccccgggcgcaacgccc
gcaggcgatggaattgttgccgaacgcggcggcatcaccacgtgggacttcagcaccgtg
gagcgccaggttacccggacggtcaagggccacgccgtcaccgggttcccggcgatcgtg
gacgaaggaaagtccgtggcactccgggtatttcagacccgcccggagcaggaggccgcc
atgcgtggcggcgtcatacgattgcttgccctgcggatcccgccacccgaccgttacgtg
ctggagcacctcagtaacacggagaagctgacgtttagccagaacccgcacggatccgtg
agcgcactcatcgcggactgcgcactggcagccatcgacaaactggttccgcaggatctg
ccatgggacaaggaggcgttcgatgcgttgtacgaggtagtccgcgcagaactgatcgat
accgtgttcacagtgacggccgtcgtcgaacgtgtcctggccagcacccgcaggatccag
aaagagctcaagtccaatgcaagcctgccgctgatcagtgccctcaacgatatgaagagc
cagctggagcagttggtctttcctggctttgtggcacagacgggctacgcgcagctcagc
caactgccgcggtaccttcagggcatcgagaaacggctgcaaaagctccctggcaacgtc
caacgggacagcttgaacatggcgatcattcaggcgctggaggatgactacgatgacgct
gtttctgctctccttccggggcgcagggcgggcaccgagttaacccgtgtgcgctggatg
atcgaagaactgcgggtgagcctctttgcggtggagctcggcacggcctactcggtgtcg
gagaagcggatccgcacggtgctgaaccaggccctggcacccgcataa
DBGET
integrated database retrieval system
