Paenarthrobacter aurescens: AAur_3021
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Entry
AAur_3021 CDS
T00447
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aau
Paenarthrobacter aurescens
Pathway
aau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAur_3021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aau03019
]
AAur_3021
03009 Ribosome biogenesis [BR:
aau03009
]
AAur_3021
Enzymes [BR:
aau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AAur_3021
Messenger RNA biogenesis [BR:
aau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AAur_3021
Ribosome biogenesis [BR:
aau03009
]
Prokaryotic type
rRNA helicases
AAur_3021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
HEM4
Motif
Other DBs
NCBI-ProteinID:
ABM09151
UniProt:
A1R913
LinkDB
All DBs
Position
complement(3297584..3299764)
Genome browser
AA seq
726 aa
AA seq
DB search
MTENLNENFDAESADVATTESADVAETSAPAEAEAPAAAAAPVETVAAETAAPAFTEAPA
PKVEEEEEEGVRFVDLGIDGRVLAALQDVGYEKPSPIQAATIPLLLEGRDVVGLAQTGTG
KTAAFAVPALSRLAELHDLNGPSRKTQALVLAPTRELALQVAEAFTSYAKHIDDFTVLPV
YGGSAYGPQLAGLRRGAQVVVGTPGRVIDHIAKGSLDLSELQYLVLDEADEMLRMGFADD
VEQIFQQTPETRQVALFSATMPGQIRRMSKQYLNNPAEISVKSKTTTGANTKQRYLQVMG
PHKLDALTRILEVEEFDGVIAFVRTKMATEDLADKLKARGFQAAAINGDIPQQQRERTVD
ALKEGRIDILVATDVAARGLDVERISHVINYDIPHDTESYVHRIGRTGRAGRSGDAILFM
TPREKYLLRSIEKATRQPVEQMHLPTAETVNTLRLGKFAERITETLESEDVAAFRDLISS
YEEEHNVPASEIAAALAVMAQGGQPLLVKELPAAPEYQKRERSKDGFGSRGPTRALTEGN
ATYRIAVGRRQRVMPGSIVGAIANEGGISSAQIGGIDIRSDHSLVELPADLSPEQLRALS
RTRIGGELINLELDNGRRPSGDRGGYSGGGAGGRGGYGDRENRGGGNFKGSGGFKKDFRK
SDGERTSADRGGRSYSDRSERTAGSFGDRDRGQASGSRFGGHGDGARKPRTGGEGSNRDF
NRKGKW
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaatctcaacgaaaacttcgacgctgagtccgctgatgtagcgaccaccgag
tccgctgatgtagcggagacctccgctcccgccgaagctgaagcaccggctgctgccgct
gcccccgtcgagaccgttgcagctgagactgcagcccccgccttcaccgaagctcctgcc
ccgaaggtagaagaagaggaagaagaaggcgtccgcttcgtcgatcttggcatcgacgga
cgcgttctggccgccctgcaggacgtcggctacgaaaagccgtcccccattcaggcagcc
accatcccgctcctcctcgaaggccgcgatgttgtaggcctcgcacagaccggtaccggc
aagaccgcagctttcgctgttcctgccctgtcccgcctggctgaacttcacgacctcaac
ggcccgtcccgcaagacccaggcgcttgttctggctccgacgcgtgaactggccctccag
gttgctgaggcattcacctcctacgccaagcacattgatgacttcacggtccttcccgtt
tacggtggctcggcttacggcccccagctcgctggcctgcgccgaggtgcacaggttgtt
gtcggtacccccggccgcgtgatcgaccacatcgccaagggttccctggacctgtccgaa
ctccagtacctggtgctggacgaagctgacgaaatgctgcgcatgggctttgccgatgac
gttgagcagatcttccagcagactcctgaaacccgccaggttgccttgttctctgccacc
atgccgggccagatccgccgcatgtccaagcagtacctgaacaacccggctgagatctcg
gtgaagtccaagaccaccaccggcgccaacaccaagcagcgctacctccaggtcatgggc
ccgcacaagctggacgccctgacccgcatccttgaggttgaagagttcgacggcgtcatc
gccttcgtgcgcaccaagatggctaccgaggacctggccgacaagctcaaggcccgcggt
ttccaagctgccgccatcaacggcgacatcccgcagcagcagcgcgaacgcactgtggac
gcgctgaaggaaggccgcatcgacatcctggttgctaccgacgtcgcggcccgtggcctt
gacgttgagcgcatcagccacgtcatcaactacgacatcccccacgacaccgagtcctac
gtgcaccgcattggccgtacgggccgtgcaggccgttccggcgatgccatcctgttcatg
acgccgcgtgagaagtacctgctgcgttccatcgaaaaggccacgcgccagccggtggag
cagatgcacctgcccacagctgagaccgtgaacacgttgcgccttggcaagttcgccgag
cgcatcacggagaccctcgaatccgaggatgtcgcagcgttccgcgacctcatctcctct
tacgaggaagagcacaacgtgccggcctccgagatcgctgcagccttggccgtcatggcc
cagggtggacagcctttgctggtcaaggaactgcctgccgctcctgagtaccagaagcgc
gagcgctccaaggacggcttcggttcccgtggcccgacccgtgcgctcaccgagggcaac
gccacctaccggatcgccgtcggacgccgtcagcgcgtcatgccgggttccatcgttggt
gccattgccaacgaaggtggcatctcttccgcacagatcggtggcatcgacatccgctcg
gaccactccctggtggagctcccggcagacctgagccccgagcagctgcgcgcactgtcc
cgcacccgcatcggtggcgagctgatcaacctcgaactggataacggacgcaggcccagc
ggcgaccgtggcggttactccggtggcggcgctggtggacgcggtggttacggcgaccgc
gaaaaccgtggcggcggaaacttcaagggcagcggcggcttcaagaaggacttccgcaag
tccgacggcgagcgtacctctgctgatcgtggcggacgctcctacagcgaccgttcagag
cgcaccgcaggcagcttcggcgaccgcgatcgtggccaggccagcggttcccgcttcggt
ggtcacggtgacggtgcccgcaagccccgcaccggcggcgaaggcagcaaccgcgatttc
aaccgcaagggcaagtggtaa
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