Paenarthrobacter aurescens: AAur_3334
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Entry
AAur_3334 CDS
T00447
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aau
Paenarthrobacter aurescens
Brite
KEGG Orthology (KO) [BR:
aau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aau03032
]
AAur_3334 (topA)
03400 DNA repair and recombination proteins [BR:
aau03400
]
AAur_3334 (topA)
Enzymes [BR:
aau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AAur_3334 (topA)
DNA replication proteins [BR:
aau03032
]
Prokaryotic type
DNA Topoisomerases
AAur_3334 (topA)
DNA repair and recombination proteins [BR:
aau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AAur_3334 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ABM06726
UniProt:
A1R9W8
LinkDB
All DBs
Position
complement(3664530..3667253)
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AA seq
907 aa
AA seq
DB search
MPSKAKTGKKLVIVESPAKSKTIAKYLGEGFIVEASIGHIRDLPQPSDLPAELKKTSLGK
FAVDIENDFKPYYVVSPDKKKKVAELKAQLKDADALYLATDGDREGEAIAWHLLEVLKPK
VPVYRMTFGEITKEAIHRAMDNLRDVDTALVDAQETRRILDRLYGYEISPVLWRKVARGL
SAGRVQSVVTRMVVDRERERMAFRAASYWDLTGQFGSDSGSFKAKLAAVDGSKVASGRDF
NDNGQLTSSTVVHLNEELATSLAAGLENAEFRVRSVDTKPYTRRPAAPFTTSTLQQEAGR
KLRFSSKSTMQVAQRLYENGYITYMRTDSSALSDEALTAARRQASELYGPEYVPQSPRVY
ANKAANAQEAHEAIRPAGDSFRTPAQVAKQLSGDEFRLYELIWKRTVASQMADAKGSTAT
IRLGAVAADGRDAEFSASGTVITFPGFLAAYEEGKDESRGDEESDEARRLPNVAKGDSLT
ASDILAVGHETSPPPRYTEASLTAELEKRGIGRPSTYASTISTIQDRGYVRKQGSALVPS
WIAFSVIRLLEQHFTDYVDYEFTADMEGDLDKIANGQAVGAAWLKHFYYGEDADPGLLSI
VNNLGEIDAREINSVPIAEGITLRVGKFGPYLESSIPTLDAKTGEVVESARANVPEELAP
DELTADKAKELMETAAPEERVLGTDPHTGHTIVAKNGRYGAYVTEIIPEMTEEQLANQPV
EYYKNGKPKPPKKPVKAKPRTGSLFKSMTVDTVTLDEALALMSLPRVLGEDADGNPITVQ
NGRFGPYLKKGTDSRSIGSEEEIFTITLEQALEIYSQPKQRGARASVPPLAEFGPDPVSE
KNIVVKEGRFGPYITDGVTNITVPRSTSLEELTRERAVELLAEKRAKGPVKRTTTRKAPA
KKATAKK
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
gtgcccagcaaggcaaaaaccggcaagaaactcgtgatcgtggagtctcccgccaagagc
aagaccatcgccaagtatcttggcgagggcttcatcgtcgaggcttcgatcggccacatc
cgggacctcccgcagccatcggacctccctgccgaactgaagaagacctcgctgggcaag
ttcgccgtcgacatcgaaaacgacttcaagccgtactacgttgtctccccggacaaaaag
aaaaaagtcgccgagctcaaggcccagctgaaagacgctgacgcactttatctcgcaact
gatggtgaccgcgaaggtgaagccatcgcgtggcacctcctggaggtcctgaagcccaag
gttcccgtttaccgcatgaccttcggtgaaatcaccaaggaagccatccacagggccatg
gataacctgcgcgatgttgacaccgctttggtggacgcccaggagacgcgtcgtattctt
gaccgcctttatggctacgagatttcccctgtcctgtggcgcaaggtggcccgcggactg
tcggccggccgtgtccagtctgtggtgacccgcatggtggttgaccgcgaacgtgaacgc
atggctttccgggcagcgtcctactgggacctcacgggccagttcggttcagactcgggt
tctttcaaggccaagcttgcggccgtggacggttccaaggttgccagcggccgggacttc
aacgacaacgggcagctgacgtcctccacggtggtgcacctcaacgaggaactggccaca
tccttggctgcaggcttggaaaacgccgaattccgcgtccgctccgtagataccaagccg
tacacccgccgccctgccgcgccgttcaccacgtccacgctgcagcaggaagccggccgt
aagctccgcttctcgtcaaagagcaccatgcaggttgcccagcgcctgtatgaaaacggc
tacatcacctatatgcgtacagactcgtctgccttgagcgatgaagcactcacggcagcc
cgccgccaggcttcggagctttacggtcccgagtacgtgccccagagcccccgcgtttac
gccaacaaggctgccaacgcccaggaagcgcacgaggccatccgtcccgcgggagactcc
ttccgcactcccgcgcaggttgccaagcagctgagcggcgacgagttccgcctgtacgag
ctcatctggaagcgcacagtggcctcccagatggctgacgccaagggttctactgccacc
atccgcctcggcgcggtagccgccgacggccgcgacgccgaattctccgcctccggtacg
gtcatcactttccccggcttcctagcagcctatgaagagggcaaggatgagagccgcggc
gacgaggaatccgatgaagcgcgtcgcctcccgaacgttgccaagggcgattccctcacg
gcttcggacattctggctgtcggccacgaaacatcgccgccgccgcgttacacggaagca
tcgctgaccgctgagttggaaaagcggggcatcggccgcccgtccacctacgcctccacc
atctccaccatccaggaccggggctacgtccgcaagcagggctccgccttggttcccagc
tggatcgcgttctccgttatccgcctgctggagcagcactttacggactacgtggactac
gagttcacggctgacatggaaggcgacctggacaagatcgccaacggccaggccgtgggc
gccgcctggctcaagcacttctactacggtgaggacgcagaccccggactgctgagcatc
gtcaacaacctcggcgaaatcgatgcccgcgagatcaactccgtgcccatcgccgagggc
atcacgttgcgcgtgggcaagttcggcccgtacttggaaagctccatccccaccttggat
gcgaagaccggtgaagtggttgagtccgcaagggccaacgtccccgaggaactcgccccg
gacgaactcacggcggacaaagccaaagagctcatggagaccgcggcccccgaggaacgg
gtcctgggaaccgatccccacaccggccacaccatcgttgccaagaacggccgctacggg
gcgtacgtcaccgagatcatccctgagatgaccgaggaacaactggccaaccagccggtg
gaatattacaagaacggcaagcccaaacctcccaaaaagcccgtgaaggcaaagccgcgc
accggttcgctgttcaagtccatgaccgtggatacggtcaccttggatgaagccctcgcg
ctcatgagcttgccccgggtcctcggcgaggacgcggacggcaaccccatcacagtgcag
aacggccgcttcggcccgtacctgaaaaagggcacggactcccgctccatcggttcggaa
gaggaaatcttcacgattaccttggaacaggcgttggagatctactcgcagcccaagcag
cgcggcgcccgtgcctccgtgccgccgctggccgagtttggaccggaccccgtttccgag
aagaacattgtggtgaaggaaggccgcttcggcccatacatcactgacggcgtcaccaac
atcaccgtcccgcgctcaacgtcactcgaagagctgacccgggaacgcgccgtcgaactt
ttggcagaaaagcgtgccaagggaccggtcaagcggaccaccacccgcaaggcgccggcc
aagaaggcaacagccaaaaagtag
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