Actinokineospora auranticolor: V5P93_000006
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Entry
V5P93_000006 CDS
T10991
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
aaur Actinokineospora auranticolor
Brite
KEGG Orthology (KO) [BR:
aaur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aaur03032
]
V5P93_000006 (gyrB)
03400 DNA repair and recombination proteins [BR:
aaur03400
]
V5P93_000006 (gyrB)
Enzymes [BR:
aaur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
V5P93_000006 (gyrB)
DNA replication proteins [BR:
aaur03032
]
Prokaryotic type
DNA Topoisomerases
V5P93_000006 (gyrB)
DNA repair and recombination proteins [BR:
aaur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
V5P93_000006 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
XGP72589
LinkDB
All DBs
Position
6909..8885
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AA seq
658 aa
AA seq
DB search
MAEDNQEKAYGAGSIGVLKGLEAVRLRPGMYIGSTGERGLHHLIWEIVDNSVDEAMAGHA
TKVDVTLLADGGVRVDDDGRGIPVEEHPEEKRSALEVVMTVLHAGGKFDSDSYAVSGGLH
GVGISVVNALSTRLEAVVKRDNHVWRQTYRDSEPVAPVERGEETRELGTSISFWPDPAIF
ETTTFNAETVARRLQEMAFLNKGLTIVLRDERVSEDEAAADVDGQAARVKERTYHYPGGL
EDFVKHINHSREAIHKKVIAFEAKGTGVEVEVAMQWNTGYSESVYTFANTINTPEGGTHE
EGFRAALTRVVNVYAREKKLLKEKDANLSGDDVREGLAAIVSIKLAEPQFEGQTKQKLGN
TEAKTFVQQTCNEWLADWFERNPADAKTIVTKAVSSAQARMAARKARELVRRKGALDIGG
LPGKLKDCRSTNPEECELYIVEGDSAGGSAKEGRDSLYQAILPIRGKIINVEKARLDRVL
KNTEVQSLITALGTGIQEDFDVAKLRYHKIVLMADADVDGQHIRTLLLTLLFRFMRGLIE
HGHVYLAQPPLYKIKWQRVDPEYAYSDRERDGLMEAGIAAGKKVNKDDGIQRYKGLGEMN
AEELWETTMDPANRTLRRVTLDDAAQADELFSVLMGEDVEARRSFITRNAKDVRFLDV
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaagacaatcaggagaaggcgtacggcgccggttccatcggcgtgctgaagggc
ctggaggccgtccggctccgcccgggtatgtacatcggctccaccggcgagcgcggtctg
caccacctgatctgggaaatcgtggacaactccgtcgacgaggcgatggcggggcacgcc
accaaggtcgacgtcaccctgctcgccgacggcggcgtccgcgtggacgacgacggccgc
ggcatcccggtcgaggaacacccggaggagaagcggtccgcgctcgaggtcgtgatgacc
gtgctgcacgcgggcggcaagttcgacagcgacagctacgccgtctccggtggtctgcac
ggtgtcggcatctccgtggtcaacgcgctgtccacccggctggaggccgtggtcaagcgc
gacaaccacgtgtggcggcagacctaccgcgactccgagccggtcgccccggtcgagcgc
ggcgaggagacccgcgagctgggcacctccatcagcttctggccggacccggcgatcttc
gagaccaccacgttcaacgccgagaccgtggcccggcgcctgcaggagatggccttcctg
aacaagggcctgaccatcgtgctgcgcgacgagcgggtctccgaggacgaggccgccgcc
gacgtcgacggccaggccgcccgcgtcaaggagcgcacctaccactacccgggtgggctc
gaggacttcgtcaagcacatcaaccacagccgcgaggccatccacaagaaggtcatcgcc
ttcgaggccaagggcaccggtgtcgaggtcgaggtcgcgatgcagtggaacaccggctac
agcgagtcggtgtacaccttcgccaacacgatcaacacccccgagggcggcacccacgag
gagggcttccgcgccgcgctgacccgggtggtcaacgtctacgcgcgcgagaagaagctg
ctcaaggagaaggacgccaacctcagcggcgacgacgtgcgcgagggcttggccgcgatc
gtgtcgatcaagctggccgagccgcagttcgagggccagaccaagcagaagctcggcaac
accgaggccaagacgttcgtgcagcagacctgcaacgagtggctggcggactggttcgag
cgcaacccggccgacgcgaagacgatcgtcaccaaggcggtgtcctcggcgcaggcccgg
atggccgcccgcaaggcccgcgagctggtccggcgcaagggcgcgctcgacatcggcggc
ctgcccggcaagctcaaggactgccggtcgaccaaccccgaggagtgcgagctctacatc
gtcgagggcgactccgcgggcggctcggcgaaggaagggcgggactcgctgtaccaggcg
atcctgccgatccgcggcaagatcatcaacgtggagaaggcccggctggaccgggtgctg
aagaacaccgaggtgcagagcctgatcaccgcgctgggcacggggatccaggaggacttc
gacgtcgccaagctgcggtaccacaagatcgtgctgatggccgacgccgacgtcgacggc
cagcacatccgcacgctgctgctgacgctgctgttccggttcatgcgcgggctcatcgag
cacggccacgtgtacctggcgcagccgccgctgtacaagatcaagtggcagcgcgtcgac
cccgagtacgcctactccgaccgcgagcgcgacggcctgatggaagcgggcatcgccgcg
ggcaagaaggtcaacaaggacgacggcatccagcggtacaagggtctcggcgagatgaac
gccgaggagctgtgggagaccaccatggacccggccaaccgcaccctgcgccgcgtcacc
ctcgacgacgccgcccaggccgacgagctgttcagcgtgctgatgggtgaggacgtcgag
gcccgccgctcgttcatcacccgcaacgccaaggacgtccgcttcctcgacgtctga
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