Actinokineospora auranticolor: V5P93_000007
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Entry
V5P93_000007 CDS
T10991
Symbol
gyrA
Name
(GenBank) intein-containing DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
aaur Actinokineospora auranticolor
Brite
KEGG Orthology (KO) [BR:
aaur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aaur03032
]
V5P93_000007 (gyrA)
03400 DNA repair and recombination proteins [BR:
aaur03400
]
V5P93_000007 (gyrA)
Enzymes [BR:
aaur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
V5P93_000007 (gyrA)
DNA replication proteins [BR:
aaur03032
]
Prokaryotic type
DNA Topoisomerases
V5P93_000007 (gyrA)
DNA repair and recombination proteins [BR:
aaur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
V5P93_000007 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
LAGLIDADG_3
Intein_splicing
LAGLIDADG_WhiA
WhiA_N
FaeA
Motif
Other DBs
NCBI-ProteinID:
XGP72590
LinkDB
All DBs
Position
8950..12756
Genome browser
AA seq
1268 aa
AA seq
DB search
MTETLPPPGDRIEPVDIQQEMQNSYIDYAMSVIVSRALPDVRDGLKPVHRRVLYSMFDTG
LRPDRSYVKCSRVVGDVMGNYHPHGDSSIYDTLVRLAQPWSMRYPLVDGQGNFGSPGNDP
AAAMRYCIDAETRVRLQDGSSVRIGDIVPDAAPNSDNPIDLKVLDRNGDPVRADRLFHSG
EHPTLRLTTREGFELTGTHNHPVLCLVSVLGVPTLLWKLLEEIQPDDRVVMQRMPADEGS
VPPAEDYAAAILAGAFVSEGFVSARRAGFNNLDKSYFDQVVDAYDVVVGGRRYLSSRIIA
SGSLLHELDVQDLSALMSSPLAELAGHRSAAKRVPEFVWNSGMFVKRAFLSSLFTGDGSC
SALPRNTVQISYSTRSARLAREVQQLLLEFGVVSKLVNYDSGEIKVVITNRRDARLFANN
LGFLQVKQEKLVAILDALPTESRSMSSDHVPFVGDYIRANGAGRWTERDWLRQHNVDRVE
RWETNRDEIVRHITEPGVLDVVEPLVDGRFYYARVASIVDAGVRPVYSLRVDTDDHAFIT
DGFVSHNTESRLTPLAMEMLRDIGEDTVDFAPNYDGKTEEPKVLPARIPNLLVNGGSGIA
VGMATNIPPHNLREVADGVIWALENPEADDDELLAALLLRIKGPDFPTKALILGTSGIED
AYRTGRGSVRMRAVVEVEEDAKGRTILVVTELPYQVNPDNLIENMAQLVRDGKLTGISEI
ADESNSRSGMRIVIGLKRDAVAKVVLNNLYKHTQLQHNFGVNMLALVDQVPRTLRLDQIV
RHYVNHQIEVIVRRTRYRLRKAQERAHILRGYAKALDMLDEVIALIRRSPSADEARTGLM
SLLEVDEIQATAILELQLRRLAALERQRIIDELAEIERYIAELQAILDSPAQQREIVRDE
LKEIVDKHGDDRRTRIIPFDGEVSVEDLIAVEDVVVTITRTGYAKRTKTDLYRAQKRGGK
GVQGAVLKQDDIVVHFFVCSTHDWMLFFTNKGRVYRAKAYELPEANRAARGQHVANLLAF
QPDEEIAQVIQIKDYQAAPYLVLATRDGLVKKSKLADFDSNRAGGLIGINLREDDELVGA
VLCSADDDLLLVSAGGQSIRFHASDDALRPMGRATSGVQGMRFNDGDELLTIGVVKDGTF
VLVATDGGYAKRTPIEDYSVQGRGGKGVLTIQHDSRRGRLVGAVIVELEDQLYAITSAGG
VIRTTVEEVRKAGRQTKGVRLMNLGEGTTLVAIARSAEEAAEAEVEAAEAEGTEGDVEGT
APTAEQAE
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaaccctgccgccgcctggtgatcgcatcgagccagtcgacatccagcaggag
atgcagaactcctacatcgactacgcgatgagcgtcatcgtcagccgcgccctcccggac
gtgcgcgacggcctcaagcccgtccaccggcgcgtgctgtactcgatgttcgacacgggc
ctgcgtcccgaccgcagctacgtcaagtgctcccgagtcgtcggcgacgtcatgggcaac
taccacccccacggcgactcgtcgatctacgacaccctggtccgcctcgcccagccgtgg
tccatgcgctacccgctggtcgacggccagggcaacttcggcagcccgggcaacgacccg
gccgccgccatgcgttactgtattgatgcagaaacccgtgtgcgcctgcaggacgggtcg
agtgtgcgcatcggcgacatcgtcccggacgcggcgccgaactcggacaacccgatcgac
ctgaaggtcctcgaccgcaacggcgacccggtccgcgcggaccggctgttccactccggt
gagcacccgacgctgcgcctcaccacgcgcgagggcttcgaactgaccggcacgcacaac
cacccggtcctgtgcctggtgtcggtgctcggcgtgccgaccctgttgtggaagctgctg
gaggagatccagcccgacgaccgcgtcgtcatgcagcgcatgcctgctgacgagggcagc
gtcccgcctgccgaggactacgccgcagccatcctggcaggcgcgttcgtcagcgagggg
tttgtctcggcgcgacgcgccgggttcaacaacctggacaagtcgtacttcgaccaggtc
gtcgacgcgtacgacgtggtagtcggtggacggcggtacctcagctcgcggatcatcgcg
tccggctcgctcctgcacgaactcgacgtgcaggacctgagtgccttgatgtcgagtccg
ctcgccgagttggccggacaccgcagtgcggccaagcgggtgccggagttcgtctggaac
tccggcatgttcgtgaagcgagcattcctcagctcactgttcaccggtgacggctcctgc
tccgcgctgccgcgaaacaccgtccagatctcgtactccacccggagcgcgcggctggcg
cgtgaggtccagcagttgctgctggagttcggcgtggtcagcaagctcgtcaactacgac
agcggcgagatcaaggtcgtcatcacgaaccgccgcgatgcgcggttgttcgcgaacaac
ctcggcttcctccaggtcaagcaggagaagctggtcgccatcctcgacgcgctcccgacc
gagagccggtcgatgtcgagcgaccacgtgcctttcgtcggcgactacatccgcgcgaac
ggtgccggtcggtggaccgaacgcgactggctgcgtcagcacaacgtcgaccgcgtcgag
cggtgggagaccaaccgggacgagatcgtccggcacatcaccgagcccggcgtgctcgac
gtggtcgagccgctggtcgacggtcggttctactacgccagggtcgcctcgatcgtcgac
gcgggtgttcggccggtgtacagcctccgggtcgacaccgacgaccacgcgttcatcacc
gacgggttcgtcagccacaacaccgagtcgcggttgacgccgctggcgatggagatgttg
cgcgacatcggcgaggacaccgtcgacttcgcgcccaactacgacgggaagaccgaagag
ccgaaggttctgccggcgcggattccgaacctgctggtcaacggtggtagcggtatcgcg
gtcgggatggcgacgaacatcccgccgcacaacctgcgcgaggtggccgacggggtcatc
tgggcgttggagaaccccgaggccgatgacgacgagctgctggcggcgctgctgctgcgg
atcaaggggccggacttcccgaccaaggcgctgatcctggggaccagcggcatcgaggac
gcctaccgcaccggtcgcggttcggtgcggatgcgggcggtcgtcgaggtggaggaggac
gccaaggggcggaccatcctcgtggtcaccgagctgccgtaccaggtcaacccggacaac
ctgatcgagaacatggcgcagctggtgcgcgacgggaagctcaccggcatctccgagatc
gccgacgagtccaactcgcgcagcggcatgcggatcgtgatcgggctcaagcgcgacgcg
gtggccaaggtcgtgctgaacaacctgtacaagcacacccagctgcagcacaacttcggc
gtcaacatgctcgccctggtcgaccaggtgccgcgcacgctgcggctcgaccagatcgtg
cggcactacgtcaaccaccagatcgaggtcatcgtccggcgcacccgctaccggctgcgc
aaggcccaggagcgcgcgcacatcctgcgcgggtacgccaaggccctggacatgctcgac
gaggtcatcgcgctgatccgccggtcgccgtcggccgacgaggcgcggaccgggttgatg
tcgctgctcgaggtcgacgagatccaggcgaccgcgatcctcgaactccagctgcgccgc
ctggccgcgctggagcggcagcgcatcatcgacgagctggccgagatcgagcgctacatc
gccgagctgcaggcgatcctggacagcccggcgcagcagcgcgagatcgtgcgcgacgag
ctgaaggagatcgtcgacaagcacggcgacgaccggcgcacccggatcatcccgttcgac
ggggaggtgtcggtcgaggacctgatcgcggtcgaggacgtcgtcgtcacgatcacccgc
accgggtacgccaagcgcaccaagaccgacctgtaccgggcgcagaagcgcggcggcaag
ggcgtgcagggcgcggtgctgaagcaggacgacatcgtcgtgcacttcttcgtgtgctcg
acgcacgactggatgctgttcttcaccaacaagggccgcgtctaccgggcgaaggcctac
gagctgccggaggccaaccgcgcggcgcgcggtcagcacgtggcgaacctgctggcgttc
cagccggacgaggagatcgcccaggtcatccagatcaaggactaccaggcggcgccgtac
ctggtgctggcgacccgtgacggtttggtgaagaagtcgaagctggccgacttcgacagc
aaccgcgcgggcggcctcatcggtatcaacctgcgtgaggacgacgaactcgtcggcgcc
gtgctgtgctcggccgacgacgacctgctgctggtgtccgcgggcggccagtccatccgc
ttccacgccagcgacgacgcgctgcggccgatgggccgggcgacgtcgggtgtgcagggc
atgcgcttcaacgacggcgacgagctgctgaccatcggcgtggtgaaggacggcacgttc
gttttggtcgccaccgacggtgggtacgccaagcgcaccccgatcgaggactactcggtc
cagggtcggggcggcaagggcgtgctcaccatccagcacgacagcaggcgtggcaggctg
gtaggcgcggtcatcgtcgagttggaggaccagctgtacgccatcacctcggcgggcggc
gtcatccgcaccaccgtcgaggaggtgcgcaaggccgggcggcagaccaagggggtcagg
ttgatgaacctcggtgaggggaccaccctggtggccatcgcccgcagcgccgaggaggcc
gccgaagccgaggtcgaggcggctgaagccgagggcaccgaaggcgacgtcgaaggcacc
gcaccgacggccgagcaggccgagtaa
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