Actinokineospora auranticolor: V5P93_001722
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Entry
V5P93_001722 CDS
T10991
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
aaur Actinokineospora auranticolor
Brite
KEGG Orthology (KO) [BR:
aaur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aaur03032
]
V5P93_001722
03036 Chromosome and associated proteins [BR:
aaur03036
]
V5P93_001722
03400 DNA repair and recombination proteins [BR:
aaur03400
]
V5P93_001722
DNA replication proteins [BR:
aaur03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
V5P93_001722
Chromosome and associated proteins [BR:
aaur03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
V5P93_001722
DNA repair and recombination proteins [BR:
aaur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
V5P93_001722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
XGP74251
LinkDB
All DBs
Position
1818738..1819427
Genome browser
AA seq
229 aa
AA seq
DB search
MNKAQLIEALTERLGDKKAAGAAVDGLVDVIVRTVNKGEKVNITGFGVFEKRARAARTAR
NPRTGETVKVKKTNVPAFRAGTMFKEVVSGAKKLPKVAATKATGTTRTATATRGTAAAKP
ATTTRAAAAKPAAAKPAAATTRSTTTRTRAAAAKPAAATTAAKATTTRTRAAAAKPAAAT
KTAAATKTAAAPKATAAKKTTTAAKTTAAKKTTAAKSSTPRATAKATKK
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcccaactcatcgaggcgttgaccgagcgtcttggcgacaagaaggccgcg
ggcgccgcggtcgacggtctggtcgacgtgatcgttcgcacggtcaacaagggcgagaag
gtcaacatcaccggcttcggcgtgttcgagaagcgcgctcgtgccgcccggaccgcgcgc
aacccgcgcaccggtgagacggtcaaggtgaagaagaccaacgttcccgccttccgcgcg
ggcacgatgttcaaggaggtcgtgagcggggcgaagaagctgcccaaggtcgcggccacc
aaggcgaccggcacgacccgcaccgcgaccgccacccgtggcaccgcggcggcgaagccc
gccaccacgacccgcgcggcggcggcgaagcccgcggcggcgaagcccgcggcggcgacc
acgcgcagcaccaccacgcgcacccgcgcggcggcggcgaagcccgcggcggcgaccacc
gcggccaaggccaccaccacgcgcacgcgcgcggcggcggcgaagccggcggcggccacc
aagaccgcggccgcgacgaagacggcggcggcccccaaggccaccgcggcgaagaagacc
accacggcggccaagaccaccgccgccaagaagacgacggccgccaagagcagcacgcct
cgggcgaccgccaaggcgaccaagaagtaa
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