Actinokineospora auranticolor: V5P93_001734
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Entry
V5P93_001734 CDS
T10991
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
aaur Actinokineospora auranticolor
Pathway
aaur03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aaur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V5P93_001734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaur03400
]
V5P93_001734
Enzymes [BR:
aaur01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
V5P93_001734
DNA repair and recombination proteins [BR:
aaur03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V5P93_001734
Prokaryotic type
V5P93_001734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
XGP74263
LinkDB
All DBs
Position
complement(1834295..1834969)
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AA seq
224 aa
AA seq
DB search
MARPLSEIVESGWAEALAPAADKIAEMGEFLRAEVAAGRTYLPAGDNVLRAFKQPFADVR
VLIVGQDPYPTPGHAVGLSFSVAPDVRPIPKSLINIYKEYVDDLGHPTPSNGDLTPWAEH
GVLLLNRALTVQPGNANSHQGKGWEEVTEQAIRALAARGGPLVAILWGRNARNLRPLLGS
VPAIESAHPSPLSARSGFFGSKPFSRANELLEQQGAAPVDWKLP
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
gtggcacgaccgctgagtgagatcgtcgagtccgggtgggccgaggcgctggcgcccgcc
gccgacaagatcgccgagatgggcgagttcctgcgcgcggaggtcgccgccgggcgcacc
tacctgcccgccggggacaacgtgctgcgcgcgttcaagcagcccttcgccgacgtgcgc
gtgctgatcgtgggccaggacccgtacccgacccccgggcacgcggtgggcctgtcgttc
tcggtggcgccggacgtccggccgatccccaagagcctcatcaacatctacaaggagtac
gtggacgacctgggtcacccgaccccgtccaacggcgacctgacgccgtgggccgagcac
ggcgtgctgctgctcaaccgggcgctgacggtgcagccgggcaacgcgaactcccaccag
ggcaaggggtgggaggaggtcaccgagcaggccatccgcgcgctggccgcgcgcggcggt
ccgctggtggcgatcctctggggccgcaacgccaggaacctgcgccccctgctgggttcg
gtccccgcgatcgagtcggcccacccgagccccctctccgcgcgcagcggcttcttcggc
tccaagccgttcagccgcgcgaacgagctgctggagcagcagggcgccgcaccggtcgac
tggaaactgccctga
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