Actinokineospora auranticolor: V5P93_001760
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Entry
V5P93_001760 CDS
T10991
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
aaur Actinokineospora auranticolor
Pathway
aaur03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aaur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V5P93_001760 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaur03400
]
V5P93_001760 (mutM)
Enzymes [BR:
aaur01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
V5P93_001760 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
V5P93_001760 (mutM)
DNA repair and recombination proteins [BR:
aaur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V5P93_001760 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
TackOD1
C1_2
Zn_ribbon_SprT
Motif
Other DBs
NCBI-ProteinID:
XGP74289
LinkDB
All DBs
Position
1861542..1862429
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AA seq
295 aa
AA seq
DB search
MPELPEVEVVRRGVQDHVAGRVVSAVEVFHPRAIRRHLPGDVDFAGRLVGRALVAARRRG
KYLWVDLSSGEALLAHLGMSGQMLVQPPGAPDEKHLRVRLRFADDGPELRFVDQRTFGGL
SVEDVVVVDGVPLPEPVAHIARDPMDPSFDLAAAVRAIRRKHTEIKRALLDQTLVSGIGN
IYADEALWLSRLHWARPTDKLSAAKVTELLGAATDVMNQALAVGGTSFDALYVNINGQSG
YFDRSLNAYGQEGLPCGRCGREIRREPFMNRSSYSCPKCQPRPTGFTPTPRERIS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgagctgcccgaggtcgaggtcgtccggcggggtgtgcaggaccacgtggcgggc
cgggtcgtgtccgcggtcgaggtcttccacccgcgtgcgatccgccgccacctgcccggt
gacgtcgacttcgccggtcgcctcgtcggccgcgcgctggtcgcggcccggcggcggggc
aagtacctgtgggtggacctgtcctcgggtgaggccctgctggcccacctggggatgagc
ggccagatgctggtccagccgccgggtgcgccggacgagaagcacctgcgggtccgcctc
aggttcgccgacgacggccccgagctgcggttcgtggaccagcggacgttcggcgggctg
tcggtcgaggacgtcgtggtggtggacggggtgccgctgccggaacccgtcgcacacatc
gcgcgcgacccgatggatccgtcgttcgacctggccgctgccgtgcgcgcgatccgccgg
aagcacaccgagatcaagcgggcgctgctcgaccagaccctggtctcgggcatcggcaac
atctacgccgacgaggccctgtggctttcccggctgcactgggcccggccgacggacaag
ctttcggcggcgaaggtcacggagctgctgggcgcggccacggacgtgatgaaccaggcc
cttgcggtgggcgggacgtcgttcgacgcgctgtacgtgaacatcaacgggcagtcgggg
tacttcgaccggtccctgaacgcgtatgggcaggagggcctgccgtgcgggcggtgtggt
cgggagatccgccgggagccgttcatgaaccggtcgtcgtactcgtgccccaagtgtcag
ccgagaccgacgggcttcacccccaccccgcgcgagcggatctcgtag
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