KEGG   Actinokineospora auranticolor: V5P93_005272
Entry
V5P93_005272      CDS       T10991                                 
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
  KO
K03090  RNA polymerase sigma-B factor
Organism
aaur  Actinokineospora auranticolor
Brite
KEGG Orthology (KO) [BR:aaur00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aaur03021]
    V5P93_005272
Transcription machinery [BR:aaur03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     V5P93_005272
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r3 Sigma70_r2 Sigma70_r4_2 HTH_23 HTH_Crp_2 HTH_3 MarR PF0610-like_N MarR_2 HTH_24 KORA HTH_28 HTH_31 Sigma70_ECF HTH_ParB DUF134 DUF7343 HTH_26 Phage_antitermQ
Other DBs
NCBI-ProteinID: XGP77710
LinkDB
Position
6107836..6108627
AA seq 263 aa
MSAASSTGPEHEYSHLAPLFAELADLADGDARRDSVRDDLVTGHLPLAEHIALRFAHRGV
GRDDLTQVATVGLINAVDRFDPGRGIDFLSFAVPTIMGEVRRYFRDTAWSVRVPRRLKEL
HLTISAAGNELSQRLGRAPTPSEIAAHLGMSREEVYEGLEAGQVYQSVSLDEALSAGDPD
SDPLADTLGEDDAALGGIEDYESLRPLIERLPERERRILMLRFFKNMTQTQIAEKIGVSQ
MHVSRLLARTLETLRAGLVTDER
NT seq 792 nt   +upstreamnt  +downstreamnt
gtgagcgcggcctcatccacgggtcccgagcacgagtacagccacctggccccgctgttc
gccgaactggccgacctggccgacggcgacgcgcggcgggactccgtgcgggacgacctc
gtcaccggccacctcccgctggccgagcacatcgcgctgcgcttcgcccaccgcggcgtc
ggccgcgacgacctcacccaggtcgccaccgtggggctgatcaacgcggtggaccggttc
gacccgggccggggcatcgacttcctgtccttcgccgtgcccacgatcatgggcgaggtg
cgccggtacttccgcgacacggcctggtcggtgcgggtgccgcggcggctcaaggagctg
cacctgaccatcagcgcggcgggcaacgagctgtcgcagcggctggggcgggcgccgacg
ccgagcgagatcgccgcgcacctggggatgagccgcgaagaggtgtacgagggcctggag
gccggtcaggtgtaccagtcggtgtcgctggacgaggcgctgtccgcgggcgaccccgac
tccgacccgctggccgacaccctcggcgaggatgacgcggcgctcggcggcatcgaggac
tacgagtcgctgcgccccctgatcgagcgcctgcccgagcgcgaacgccggatcctgatg
ctgcggttcttcaagaacatgacccagacccagatcgcggagaagatcggcgtctcccag
atgcacgtctcccggctgctggcgcgcacgctggaaacactgcgtgccggactggtgacc
gacgagcgctga

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