Actinokineospora auranticolor: V5P93_005273
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Entry
V5P93_005273 CDS
T10991
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
aaur Actinokineospora auranticolor
Pathway
aaur03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aaur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
V5P93_005273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaur03400
]
V5P93_005273
DNA repair and recombination proteins [BR:
aaur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
V5P93_005273
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF1192
DUF6058
BHD_2
Motif
Other DBs
NCBI-ProteinID:
XGP77711
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All DBs
Position
6108700..6109653
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AA seq
317 aa
AA seq
DB search
MARPVWHGAINFGLVTVPVDMFGATEDHTISFRQFERGTSDRIRYKRVNERTGAEVAYSD
IVKGAEIGGGEYVIIEPEELDQIAPGRSRTIDITSFVGLDEIDPVHFQKTYWLAPSKEEY
GKAYGLLLQAMRKTNRAGIATFVMRGKEYLTAVRAGDDDLLVLTTMLFIEDIRDPAKELK
SLPEITPARGKELDMAVNLIESMADDWNPHDYHDTYTQRVEQLIEDKKQGREVVAGEEPS
RPTKVVDLFEALSKSVESRRKRRADPGSEEQAEDLGSLSKADLDRRARELDIKGRSKMSR
PDLEAAVAAAIRPRRAS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
gtggcacgaccggtttggcacggcgcgatcaacttcggtctggtcacggtgccggtggac
atgttcggggcgaccgaggaccacaccatcagcttccgccagttcgagcggggcacctcg
gaccgcatccgctacaagcgcgtcaacgagcgcaccggagccgaggtggcgtactccgac
atcgtcaagggcgccgagatcggcggcggcgagtacgtgatcatcgaaccggaggagctg
gaccagatcgcccccggccgctcgcgcacgatcgacatcacctcgttcgtgggactggac
gagatcgacccggtgcacttccagaagacgtactggctggcaccgtcgaaagaggaatac
ggcaaggcgtacggcctgctgctgcaggcgatgcgcaagaccaaccgggcgggcatcgcc
acgttcgtcatgcgcggcaaggaatacctgacggcggtccgcgcgggcgacgacgacctg
ctggtgctgaccacgatgctgttcatcgaggacatccgcgacccggcgaaggaactgaag
tcgctgcccgagatcaccccggcccgcggcaaggaactcgacatggcggtcaacctcatc
gagtccatggccgacgactggaacccccacgactaccacgacacctacacccaacgggtg
gagcagctgatcgaagacaagaaacagggccgcgaagtggtggcgggcgaggaacccagc
cgcccgaccaaggtcgtggacctgttcgaggcgttgagcaagagcgtggagagcaggcgg
aaacgccgcgcggacccgggttccgaagagcaggcggaggatttgggtagcctgagcaag
gcggatctcgaccggagggcgagggaactggacatcaagggccgctccaagatgtcccgc
cccgacctggaggcagccgtagccgccgccatccgcccccggcgcgcctcctga
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